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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_528.1_27503
Locus scaffold528.1 : 79686 ... 87992 : +
To GenomeBrowser scaffold528.1:79686..87992
Genes list of scaffold scaffold528.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_528.1_27503.t1 1 1 Flavoprotein 17 121 3.6e-38 130.1 3.00018e-42 4.5e-38 129.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_528.1_27503.t1 gi|524893554|ref|XP_005103286.1| PREDICTED: uncharacterized protein LOC101860265 isoform X1 [Aplysia californica] 0.0
pfu_aug2.0_528.1_27503.t1 gi|632939092|ref|XP_007907620.1| PREDICTED: phosphopantothenoylcysteine decarboxylase isoform X1 [Callorhinchus milii] 0.0
pfu_aug2.0_528.1_27503.t1 gi|695164777|ref|XP_009510800.1| PREDICTED: phosphopantothenoylcysteine decarboxylase [Phalacrocorax carbo] 0.0
pfu_aug2.0_528.1_27503.t1 gi|697032713|ref|XP_009578522.1| PREDICTED: phosphopantothenoylcysteine decarboxylase [Fulmarus glacialis] 0.0
pfu_aug2.0_528.1_27503.t1 gi|241601341|ref|XP_002405284.1| phosphopantothenoylcysteine decarboxylase, putative [Ixodes scapularis] 0.0

Transcript
Transcript IDpfu_aug2.0_528.1_27503.t1
Definition-
>pfu_aug2.0_528.1_27503.t1
atggccctgtcacaccttcacttttttggtcaacgcacaggtaacgaccaacttgaaattaaggttgtgtccacagagaa
tgctttgcatttctttgaccaaagtcaccttcaggtaccagtgttgttggatagagatgaatggcagggttggaagcaaa
tgagtgatccagttcttcatatagagttgagaagatgggccgatttaatgttgatagctcccttggatgccaatactttg
gctaaaatagcaaatggaatatgtgataacttgcttacatgcattgtacgagcatgggacatgcagcgccccctgttgtt
tgcgcctgctatgaacacttttatgtgggatcatccaatcacagctcagcaaattaatgttcttaagacatttggataca
aagaaattccatgtatcaagaagaaacttgcttgtggagatacagatgggtatgtagcccctgggggttgggatttttaa

Protein
Protein IDpfu_aug2.0_528.1_27503.t1
Definition-
>pfu_aug2.0_528.1_27503.t1
MALSHLHFFGQRTGNDQLEIKVVSTENALHFFDQSHLQVPVLLDRDEWQGWKQMSDPVLHIELRRWADLMLIAPLDANTL
AKIANGICDNLLTCIVRAWDMQRPLLFAPAMNTFMWDHPITAQQINVLKTFGYKEIPCIKKKLACGDTDGYVAPGGWDF

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