Gene
| Gene Model ID | pfu_aug2.0_528.1_27509 |
|---|---|
| Locus | scaffold528.1 : 237355 ... 239079 : + |
| To GenomeBrowser | scaffold528.1:237355..239079 |
| Genes list of scaffold | scaffold528.1 |
| Synonym | pfu_aug1.0_5662.1_23858 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_528.1_27509.t1 | 1 | 1 | Fork_head | 80 | 172 | 4.1e-38 | 129.3 | 5.70048e-42 | 8.4e-38 | 128.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_528.1_27509.t1 | gi|524899057|ref|XP_005105969.1| | PREDICTED: forkhead box protein F1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_528.1_27509.t1 | gi|260798592|ref|XP_002594284.1| | hypothetical protein BRAFLDRAFT_65139 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_528.1_27509.t1 | gi|573893546|ref|XP_006634525.1| | PREDICTED: forkhead box protein F2-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_528.1_27509.t1 | gi|548337577|ref|XP_005721471.1| | PREDICTED: forkhead box protein F2-like [Pundamilia nyererei] | 0.0 |
| pfu_aug2.0_528.1_27509.t1 | gi|583982375|ref|XP_006786484.1| | PREDICTED: forkhead box protein F2-like [Neolamprologus brichardi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_528.1_27509.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_528.1_27509.t1 atggtgtcggttcaagacgtgaaaccgatgactaccgagttagagctattgcaggatgttgaaaggaaagttgttccaaa atctgagccaggattttctgatgaaagtgcagcatcagacgatgatgacgaggaatcagccgaggactcgcagacgacac ctcagccaaatccggaatcgccaacaacaggacagaaaaatccaaagaaatctggagttggtgtgagaaggcaggagaag ccaccctattcttatattgccctcatcgtcatggcaattcaggctacacccaacaaaagatgcaccctcagtgaaattta tcagtttctgcagcagagatttccgtttttccggggatcgtaccaaggatggaagaactcagtgcggcacaacctctcct taaacgagtgctttattaaattaccaaaaggacttggaaggccgggaaaaggacactattggaccattgatccggctgca gaattcatgttcgaggagggatctttccgcagacgaccgcgtggtttccggcggaaatgtcaggcattaaagcccttcgg aatgctcgggatcaatggtatgggaagtggacagtcgatgatcggatctcattatgacttgttccaaaatacaaatatgt cgtctatgaatatgcagtgctccgggaacaccacacaaacctacgacaacacgggaatgatgcagcagaactcaaccctc caccactctaacttttcaccgatgcctcaacacaatcagaatttgaattgcagttttaacatgacaatgaatggtcgata tggaccaagctgtgctttatcaggactagagggtgactacgtacagtcccccgcaccaaacactttacctgtgtacgata gagaccattattggtccgctcaaagatactcaaatatgacaaaacaacagacattgagtccggcagggagtacgggatcg attccgagcatttcaccagcaagttccggcgaccactctccttacgggtccaatattgtgacgacctcagaaccaatgga cttagctttagctggtgggtacactttttaa |
|
Protein
| Protein ID | pfu_aug2.0_528.1_27509.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_528.1_27509.t1 MVSVQDVKPMTTELELLQDVERKVVPKSEPGFSDESAASDDDDEESAEDSQTTPQPNPESPTTGQKNPKKSGVGVRRQEK PPYSYIALIVMAIQATPNKRCTLSEIYQFLQQRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPAA EFMFEEGSFRRRPRGFRRKCQALKPFGMLGINGMGSGQSMIGSHYDLFQNTNMSSMNMQCSGNTTQTYDNTGMMQQNSTL HHSNFSPMPQHNQNLNCSFNMTMNGRYGPSCALSGLEGDYVQSPAPNTLPVYDRDHYWSAQRYSNMTKQQTLSPAGSTGS IPSISPASSGDHSPYGSNIVTTSEPMDLALAGGYTF |
|