Gene
| Gene Model ID | pfu_aug2.0_529.1_30861 |
|---|---|
| Locus | scaffold529.1 : 50858 ... 55925 : - |
| To GenomeBrowser | scaffold529.1:50858..55925 |
| Genes list of scaffold | scaffold529.1 |
| Synonym | pfu_aug1.0_20371.1_11310 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_529.1_30861.t1 | 1 | 1 | Isochorismatase | 1 | 141 | 7.2e-26 | 91.1 | 1.4e-29 | 1.0e-25 | 90.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_529.1_30861.t1 | gi|676426406|ref|XP_009044613.1| | hypothetical protein LOTGIDRAFT_198478 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_529.1_30861.t1 | gi|524905947|ref|XP_005108331.1| | PREDICTED: isochorismatase domain-containing protein 2, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_529.1_30861.t1 | gi|260800958|ref|XP_002595363.1| | hypothetical protein BRAFLDRAFT_113855 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_529.1_30861.t1 | gi|291238288|ref|XP_002739066.1| | PREDICTED: isochorismatase domain-containing protein 2, mitochondrial-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_529.1_30861.t1 | gi|148237661|ref|NP_001088698.1| | isochorismatase domain-containing protein 2, mitochondrial precursor [Xenopus laevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_529.1_30861.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_529.1_30861.t1 atgcaagaaaagtttagaggaaacattgcatattatcctcaaataatagtggtggcaaatagaatgcttcaagccgcaga agctttggaaatgcctgtagttgtaaccgagcaatatcccaaaggtcttggccctacagtgtcagaattggacatcagta agcacaaggcagtggctaaaactcagttctctatgttagttccagaggtagtggataggctgaaggatctaaaagatatc aattcagtagtactgtgtggtatagagaaccatgtgtgtgtacagaatacagtgttagaccttctagaagaacatttcga tgtacatgtcgtagcagatgcttgctcctcaaggtcaatggtggacagattatttgcttttcaacgtatgcgagaggcgg gtgcctttgtaacaaccagtgagtgtatgttgcttggtctttgtggagatgcagctcacccaaagttccgctcgatacag aaattaatatgggactctgcacctgacagcggtctcctaactacaaagataaatgacggcacacctgtatga |
|
Protein
| Protein ID | pfu_aug2.0_529.1_30861.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_529.1_30861.t1 MQEKFRGNIAYYPQIIVVANRMLQAAEALEMPVVVTEQYPKGLGPTVSELDISKHKAVAKTQFSMLVPEVVDRLKDLKDI NSVVLCGIENHVCVQNTVLDLLEEHFDVHVVADACSSRSMVDRLFAFQRMREAGAFVTTSECMLLGLCGDAAHPKFRSIQ KLIWDSAPDSGLLTTKINDGTPV |
|