Gene
| Gene Model ID | pfu_aug2.0_529.1_30866 |
|---|---|
| Locus | scaffold529.1 : 94721 ... 115465 : - |
| To GenomeBrowser | scaffold529.1:94721..115465 |
| Genes list of scaffold | scaffold529.1 |
| Synonym | pfu_aug1.0_2596.1_66388 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_529.1_30866.t1 | 11 | 1 | LRR_8 | 127 | 182 | 0.0 | 177.0 | 8.2e-11 | 1.5e-07 | 31.0 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 1 | LRR_1 | 127 | 142 | 1.9e-37 | 121.5 | 0.025 | 46.0 | 4.6 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 1 | LRR_7 | 127 | 139 | 5.7e-18 | 61.8 | 3.0 | 5500.0 | -1.4 |
| pfu_aug2.0_529.1_30866.t1 | 14 | 1 | LRR_4 | 128 | 163 | 0.0 | 221.1 | 1.5e-08 | 2.7e-05 | 23.6 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 2 | LRR_7 | 147 | 163 | 5.7e-18 | 61.8 | 0.0055 | 10.0 | 6.8 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 2 | LRR_1 | 148 | 169 | 1.9e-37 | 121.5 | 0.00058 | 1.1 | 9.5 |
| pfu_aug2.0_529.1_30866.t1 | 14 | 2 | LRR_4 | 170 | 210 | 0.0 | 221.1 | 2.4e-13 | 4.5e-10 | 38.9 |
| pfu_aug2.0_529.1_30866.t1 | 11 | 2 | LRR_8 | 170 | 228 | 0.0 | 177.0 | 2.1e-15 | 3.8e-12 | 45.7 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 3 | LRR_7 | 170 | 186 | 5.7e-18 | 61.8 | 6.1e-05 | 0.11 | 12.7 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 3 | LRR_1 | 171 | 192 | 1.9e-37 | 121.5 | 0.00012 | 0.23 | 11.6 |
| pfu_aug2.0_529.1_30866.t1 | 14 | 3 | LRR_4 | 193 | 240 | 0.0 | 221.1 | 7.5e-12 | 1.4e-08 | 34.1 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 4 | LRR_7 | 193 | 209 | 5.7e-18 | 61.8 | 7.5e-05 | 0.14 | 12.4 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 4 | LRR_1 | 194 | 210 | 1.9e-37 | 121.5 | 2.2e-05 | 0.041 | 13.9 |
| pfu_aug2.0_529.1_30866.t1 | 14 | 4 | LRR_4 | 217 | 255 | 0.0 | 221.1 | 1.8e-09 | 3.2e-06 | 26.6 |
| pfu_aug2.0_529.1_30866.t1 | 11 | 3 | LRR_8 | 217 | 274 | 0.0 | 177.0 | 1.6e-11 | 2.9e-08 | 33.3 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 5 | LRR_1 | 217 | 238 | 1.9e-37 | 121.5 | 0.0039 | 7.1 | 7.0 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 5 | LRR_7 | 217 | 230 | 5.7e-18 | 61.8 | 0.11 | 200.0 | 2.9 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 6 | LRR_7 | 237 | 252 | 5.7e-18 | 61.8 | 0.41 | 770.0 | 1.1 |
| pfu_aug2.0_529.1_30866.t1 | 14 | 5 | LRR_4 | 239 | 278 | 0.0 | 221.1 | 1.0e-09 | 1.9e-06 | 27.3 |
| pfu_aug2.0_529.1_30866.t1 | 11 | 4 | LRR_8 | 240 | 297 | 0.0 | 177.0 | 1.8e-08 | 3.3e-05 | 23.5 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 6 | LRR_1 | 240 | 260 | 1.9e-37 | 121.5 | 0.021 | 38.0 | 4.8 |
| pfu_aug2.0_529.1_30866.t1 | 11 | 5 | LRR_8 | 263 | 320 | 0.0 | 177.0 | 4.9e-09 | 9.0e-06 | 25.3 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 7 | LRR_1 | 263 | 284 | 1.9e-37 | 121.5 | 7.2e-05 | 0.13 | 12.3 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 7 | LRR_7 | 263 | 278 | 5.7e-18 | 61.8 | 0.0056 | 10.0 | 6.8 |
| pfu_aug2.0_529.1_30866.t1 | 14 | 6 | LRR_4 | 287 | 324 | 0.0 | 221.1 | 6.4e-10 | 1.2e-06 | 27.9 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 8 | LRR_1 | 287 | 307 | 1.9e-37 | 121.5 | 0.00033 | 0.61 | 10.3 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 8 | LRR_7 | 287 | 300 | 5.7e-18 | 61.8 | 0.71 | 1300.0 | 0.4 |
| pfu_aug2.0_529.1_30866.t1 | 11 | 6 | LRR_8 | 309 | 366 | 0.0 | 177.0 | 5.0e-13 | 9.3e-10 | 38.1 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 9 | LRR_1 | 309 | 330 | 1.9e-37 | 121.5 | 0.002 | 3.8 | 7.9 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 9 | LRR_7 | 309 | 324 | 5.7e-18 | 61.8 | 0.0063 | 12.0 | 6.6 |
| pfu_aug2.0_529.1_30866.t1 | 14 | 7 | LRR_4 | 313 | 347 | 0.0 | 221.1 | 3.4e-07 | 0.00064 | 19.2 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 10 | LRR_1 | 335 | 354 | 1.9e-37 | 121.5 | 0.0053 | 9.9 | 6.6 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 10 | LRR_7 | 336 | 347 | 5.7e-18 | 61.8 | 1.2 | 2200.0 | -0.3 |
| pfu_aug2.0_529.1_30866.t1 | 14 | 8 | LRR_4 | 338 | 370 | 0.0 | 221.1 | 1.7e-07 | 0.00031 | 20.2 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 11 | LRR_7 | 355 | 369 | 5.7e-18 | 61.8 | 0.28 | 520.0 | 1.6 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 11 | LRR_1 | 356 | 370 | 1.9e-37 | 121.5 | 0.17 | 310.0 | 2.0 |
| pfu_aug2.0_529.1_30866.t1 | 14 | 9 | LRR_4 | 383 | 394 | 0.0 | 221.1 | 0.29 | 530.0 | 0.3 |
| pfu_aug2.0_529.1_30866.t1 | 11 | 7 | LRR_8 | 383 | 418 | 0.0 | 177.0 | 4.3e-06 | 0.008 | 15.9 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 12 | LRR_1 | 383 | 400 | 1.9e-37 | 121.5 | 0.041 | 76.0 | 3.9 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 12 | LRR_7 | 403 | 419 | 5.7e-18 | 61.8 | 0.012 | 21.0 | 5.8 |
| pfu_aug2.0_529.1_30866.t1 | 14 | 10 | LRR_4 | 404 | 449 | 0.0 | 221.1 | 6.9e-09 | 1.3e-05 | 24.7 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 13 | LRR_1 | 404 | 423 | 1.9e-37 | 121.5 | 0.0035 | 6.5 | 7.2 |
| pfu_aug2.0_529.1_30866.t1 | 11 | 8 | LRR_8 | 424 | 461 | 0.0 | 177.0 | 1.0e-06 | 0.0019 | 17.9 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 13 | LRR_7 | 426 | 442 | 5.7e-18 | 61.8 | 0.57 | 1100.0 | 0.7 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 14 | LRR_1 | 429 | 448 | 1.9e-37 | 121.5 | 0.0019 | 3.4 | 8.0 |
| pfu_aug2.0_529.1_30866.t1 | 14 | 11 | LRR_4 | 449 | 487 | 0.0 | 221.1 | 1.5e-12 | 2.8e-09 | 36.3 |
| pfu_aug2.0_529.1_30866.t1 | 11 | 9 | LRR_8 | 450 | 507 | 0.0 | 177.0 | 3.1e-12 | 5.8e-09 | 35.5 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 15 | LRR_1 | 450 | 471 | 1.9e-37 | 121.5 | 0.0001 | 0.19 | 11.8 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 14 | LRR_7 | 450 | 465 | 5.7e-18 | 61.8 | 0.031 | 57.0 | 4.5 |
| pfu_aug2.0_529.1_30866.t1 | 14 | 12 | LRR_4 | 472 | 511 | 0.0 | 221.1 | 2.0e-12 | 3.7e-09 | 36.0 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 16 | LRR_1 | 473 | 494 | 1.9e-37 | 121.5 | 0.00016 | 0.29 | 11.3 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 15 | LRR_7 | 473 | 488 | 5.7e-18 | 61.8 | 0.00054 | 1.0 | 9.8 |
| pfu_aug2.0_529.1_30866.t1 | 11 | 10 | LRR_8 | 496 | 551 | 0.0 | 177.0 | 3.0e-08 | 5.5e-05 | 22.8 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 17 | LRR_1 | 497 | 515 | 1.9e-37 | 121.5 | 0.0094 | 17.0 | 5.9 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 16 | LRR_7 | 497 | 511 | 5.7e-18 | 61.8 | 0.013 | 25.0 | 5.6 |
| pfu_aug2.0_529.1_30866.t1 | 14 | 13 | LRR_4 | 519 | 552 | 0.0 | 221.1 | 9.1e-09 | 1.7e-05 | 24.3 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 18 | LRR_1 | 519 | 538 | 1.9e-37 | 121.5 | 0.021 | 39.0 | 4.8 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 17 | LRR_7 | 519 | 534 | 5.7e-18 | 61.8 | 0.036 | 66.0 | 4.3 |
| pfu_aug2.0_529.1_30866.t1 | 11 | 11 | LRR_8 | 541 | 591 | 0.0 | 177.0 | 2.7e-05 | 0.05 | 13.3 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 19 | LRR_1 | 542 | 560 | 1.9e-37 | 121.5 | 0.0071 | 13.0 | 6.2 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 18 | LRR_7 | 542 | 558 | 5.7e-18 | 61.8 | 0.0019 | 3.4 | 8.2 |
| pfu_aug2.0_529.1_30866.t1 | 19 | 19 | LRR_7 | 565 | 581 | 5.7e-18 | 61.8 | 0.085 | 160.0 | 3.2 |
| pfu_aug2.0_529.1_30866.t1 | 14 | 14 | LRR_4 | 566 | 591 | 0.0 | 221.1 | 0.00067 | 1.2 | 8.7 |
| pfu_aug2.0_529.1_30866.t1 | 20 | 20 | LRR_1 | 566 | 583 | 1.9e-37 | 121.5 | 0.0019 | 3.6 | 7.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_529.1_30866.t1 | gi|524898503|ref|XP_005105699.1| | PREDICTED: leucine-rich repeat protein soc-2 homolog isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_529.1_30866.t1 | gi|524898505|ref|XP_005105700.1| | PREDICTED: leucine-rich repeat protein soc-2 homolog isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_529.1_30866.t1 | gi|676457327|ref|XP_009054613.1| | hypothetical protein LOTGIDRAFT_175347 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_529.1_30866.t1 | gi|383865861|ref|XP_003708391.1| | PREDICTED: leucine-rich repeat protein soc-2 homolog [Megachile rotundata] | 0.0 |
| pfu_aug2.0_529.1_30866.t1 | gi|380011078|ref|XP_003689640.1| | PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis florea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_529.1_30866.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_529.1_30866.t1 atgtcacagaaggcagtgaaatctggaaattcatctgctgcagcaagaatggctcattacgatattagcagtgcaccgcc tttcgtgaatccaggatctagtttaactcagtctgacattgatgatattgcaccaggatcaagagaaccagctaacttgg atgacacagtttctattggtgatggcagagatgcaagccgaggcgttgagaaaaagggaagttccggaagtatttctaca aatgacccatcacgaccaaagacagtcacggttaaacagccaggaaagaaaaacaaagctacagtcccaaagaaaatgcc accaaaggctgatctggatgtttcaaaggaattcaaaaagtgtatagctgatgaagccaaacgtttagatctaagtaaat cacagatttctgttatccctaatacagttaaagagttaacacagctacaagaattttacttgtatggaaacaagttaggg actttacctccagagattggttgcttaacgaatcttcagaaacttggactaagtgagaattcactaactacgcttcctga aactttgcagaatctgacgcaattacgagtactggatctacggcataatagactcaatgagattccagaagttgtatacc aactacggtcattaacaactttattccttaggtttaacagaattaaacatgtagatgaagctattagtaatttaaaaaat ttaacaatatttagtttacgagaaaacaaaatacccaaattaccacaaggcattggccagctggttaacttggtgacatt tgatatttctcacaatcatctggagcacctacctgttgaaattggtaattgtgtgatgctgaattcccttgatctccaac acaatgaacttctagatatcccagagtcaataggcaatttgaaatctctgtcacgtctaggcttaaggtataacaggttg acttttatacctaagacgttagccaactgtataaatatggacgagttcaatgtggagggaaacaacatatcacaattacc cgaaggtctattgtctagcttaacaaatttgaccagtataacgttatcacggaatgctttccaatcctacccctcaggag gtcccgctcagttctgttctgtatattccatcaatatggagcacaatcagataaacaaaattccactaggaatattctca cgagcttcaagtctcaccaaactcaacatgaaagacaaccagctctccttcttgccattagacattggtagctggacgaa tatggtggagttgaatttaggcacaaatcaactgtctcgtgtacccgatgacatacagaatctagaaaagttggaggtcc tgatccttagtaataatcttctaaagagattacctccaagtataggcaacttaaagcgtttgcgggttttggacctggag gaaaataagttagaatcactacctcatgagatagggcagctgagggagctcaccaggcttgtggtgcagtccaatcaatt aacaaacctgcccagagccataggctgtttatctaaactggaatatttaggggctggagaaaacaatctgacttcacttc caacagaaataggtacattagagaacctagagtctttgtatataaatgataatccagaactgcacagtttaccttacgaa ctagtcttgtgtggaaacctgcaaattatgagcatagaaaactgcccattaagtcagattcccccagaaatagtagccaa aggtccctcattggtaatccagtatttgagaatacagagtccctactgtcagatgtaa |
|
Protein
| Protein ID | pfu_aug2.0_529.1_30866.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_529.1_30866.t1 MSQKAVKSGNSSAAARMAHYDISSAPPFVNPGSSLTQSDIDDIAPGSREPANLDDTVSIGDGRDASRGVEKKGSSGSIST NDPSRPKTVTVKQPGKKNKATVPKKMPPKADLDVSKEFKKCIADEAKRLDLSKSQISVIPNTVKELTQLQEFYLYGNKLG TLPPEIGCLTNLQKLGLSENSLTTLPETLQNLTQLRVLDLRHNRLNEIPEVVYQLRSLTTLFLRFNRIKHVDEAISNLKN LTIFSLRENKIPKLPQGIGQLVNLVTFDISHNHLEHLPVEIGNCVMLNSLDLQHNELLDIPESIGNLKSLSRLGLRYNRL TFIPKTLANCINMDEFNVEGNNISQLPEGLLSSLTNLTSITLSRNAFQSYPSGGPAQFCSVYSINMEHNQINKIPLGIFS RASSLTKLNMKDNQLSFLPLDIGSWTNMVELNLGTNQLSRVPDDIQNLEKLEVLILSNNLLKRLPPSIGNLKRLRVLDLE ENKLESLPHEIGQLRELTRLVVQSNQLTNLPRAIGCLSKLEYLGAGENNLTSLPTEIGTLENLESLYINDNPELHSLPYE LVLCGNLQIMSIENCPLSQIPPEIVAKGPSLVIQYLRIQSPYCQM |
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