Gene
Gene Model ID | pfu_aug2.0_529.1_30867 |
---|---|
Locus | scaffold529.1 : 118596 ... 126565 : + |
To GenomeBrowser | scaffold529.1:118596..126565 |
Genes list of scaffold | scaffold529.1 |
Synonym | pfu_aug1.0_2596.1_66389 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_529.1_30867.t1 | 1 | 1 | Ribosomal_L32e | 15 | 124 | 0.0 | 168.4 | 0.0 | 0.0 | 168.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_529.1_30867.t1 | gi|675888134|ref|XP_009029569.1| | hypothetical protein HELRODRAFT_115955 [Helobdella robusta] | 0.0 |
pfu_aug2.0_529.1_30867.t1 | gi|524880074|ref|XP_005096705.1| | PREDICTED: 60S ribosomal protein L32-like [Aplysia californica] | 0.0 |
pfu_aug2.0_529.1_30867.t1 | gi|585679858|ref|XP_006819595.1| | PREDICTED: 60S ribosomal protein L32-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
pfu_aug2.0_529.1_30867.t1 | gi|58332676|ref|NP_001011414.1| | ribosomal protein L32 [Xenopus (Silurana) tropicalis] | 0.0 |
pfu_aug2.0_529.1_30867.t1 | gi|593741536|ref|XP_007126271.1| | PREDICTED: 60S ribosomal protein L32 isoform X1 [Physeter catodon] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_529.1_30867.t1 |
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Definition | - |
>pfu_aug2.0_529.1_30867.t1 atggctattcgtcccctggtaaagcaaagaaatgttaaaaagaggaacaagaagtttatcagacatcagtctgatagata tgtaaaagtaaaggcaaactggcgtaagccaaagggtatcgataaccgagttaggaggagatttaaaggacagttcttga tgcccaatattggttatggtaccaacaagaagacccgccatgtgatgcctgatggattcaaaaagttccttgtacacaac acaaaggaattggaagtgttattgatgcagaataggacattttcagcagaaattgcccataatgtgtcaagtaaaaagag gaaggaaatagtggagcgagctcagcagcttgccatcaaagtgaccaatcctaatgctcgtcttaggtctgaagatgatg aatag |
Protein
Protein ID | pfu_aug2.0_529.1_30867.t1 |
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Definition | - |
>pfu_aug2.0_529.1_30867.t1 MAIRPLVKQRNVKKRNKKFIRHQSDRYVKVKANWRKPKGIDNRVRRRFKGQFLMPNIGYGTNKKTRHVMPDGFKKFLVHN TKELEVLLMQNRTFSAEIAHNVSSKKRKEIVERAQQLAIKVTNPNARLRSEDDE |