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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_529.1_30867
Locus scaffold529.1 : 118596 ... 126565 : +
To GenomeBrowser scaffold529.1:118596..126565
Genes list of scaffold scaffold529.1
Synonym pfu_aug1.0_2596.1_66389

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_529.1_30867.t1 1 1 Ribosomal_L32e 15 124 0.0 168.4 0.0 0.0 168.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_529.1_30867.t1 gi|675888134|ref|XP_009029569.1| hypothetical protein HELRODRAFT_115955 [Helobdella robusta] 0.0
pfu_aug2.0_529.1_30867.t1 gi|524880074|ref|XP_005096705.1| PREDICTED: 60S ribosomal protein L32-like [Aplysia californica] 0.0
pfu_aug2.0_529.1_30867.t1 gi|585679858|ref|XP_006819595.1| PREDICTED: 60S ribosomal protein L32-like isoform X1 [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_529.1_30867.t1 gi|58332676|ref|NP_001011414.1| ribosomal protein L32 [Xenopus (Silurana) tropicalis] 0.0
pfu_aug2.0_529.1_30867.t1 gi|593741536|ref|XP_007126271.1| PREDICTED: 60S ribosomal protein L32 isoform X1 [Physeter catodon] 0.0

Transcript
Transcript IDpfu_aug2.0_529.1_30867.t1
Definition-
>pfu_aug2.0_529.1_30867.t1
atggctattcgtcccctggtaaagcaaagaaatgttaaaaagaggaacaagaagtttatcagacatcagtctgatagata
tgtaaaagtaaaggcaaactggcgtaagccaaagggtatcgataaccgagttaggaggagatttaaaggacagttcttga
tgcccaatattggttatggtaccaacaagaagacccgccatgtgatgcctgatggattcaaaaagttccttgtacacaac
acaaaggaattggaagtgttattgatgcagaataggacattttcagcagaaattgcccataatgtgtcaagtaaaaagag
gaaggaaatagtggagcgagctcagcagcttgccatcaaagtgaccaatcctaatgctcgtcttaggtctgaagatgatg
aatag

Protein
Protein IDpfu_aug2.0_529.1_30867.t1
Definition-
>pfu_aug2.0_529.1_30867.t1
MAIRPLVKQRNVKKRNKKFIRHQSDRYVKVKANWRKPKGIDNRVRRRFKGQFLMPNIGYGTNKKTRHVMPDGFKKFLVHN
TKELEVLLMQNRTFSAEIAHNVSSKKRKEIVERAQQLAIKVTNPNARLRSEDDE

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