Gene
| Gene Model ID | pfu_aug2.0_529.1_30869 |
|---|---|
| Locus | scaffold529.1 : 137566 ... 142595 : - |
| To GenomeBrowser | scaffold529.1:137566..142595 |
| Genes list of scaffold | scaffold529.1 |
| Synonym | pfu_aug1.0_2596.1_66391 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_529.1_30869.t1 | 1 | 1 | Glyco_transf_54 | 71 | 315 | 0.0 | 246.4 | 0.0 | 0.0 | 245.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_529.1_30869.t1 | gi|525023801|ref|XP_005059378.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like isoform X1 [Ficedula albicollis] | 0.0 |
| pfu_aug2.0_529.1_30869.t1 | gi|727034852|ref|XP_010402827.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like isoform X2 [Corvus cornix cornix] | 0.0 |
| pfu_aug2.0_529.1_30869.t1 | gi|543276999|ref|XP_005426843.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like [Geospiza fortis] | 0.0 |
| pfu_aug2.0_529.1_30869.t1 | gi|669280805|ref|XP_008632877.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like [Corvus brachyrhynchos] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_529.1_30869.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_529.1_30869.t1 atgatcgatgacggtaactcaatacgtggcttgtggcagggacaactgtttgattatcctgatattttatttgcttctaa tgaaacggaggaaaatgttacagaagagttaccatggttacaaatgggaaaacccactcatgaaagtattgtcgttccac ctttattagttgacggtgttgaaaaatatgtaggatacgccaagaatcagtccttgaagtatgggaatcatgtaactgac cgagtgtacctttccatagggattccgactgtgagcagagcctggggaaatgaaaattatttattcaaaactttagaatc attgattgcgaattcatcaccggaggatctaacgaggatggtttttgtcgtcttcatggctgattttaataacacttgga atgaagtatctgccaaaaacctcagaaaaagatatttcgatctatgtgagaacggaacaatacaaatcgttacggttccc tgtggtatatatccagacttttctcagctgaacggaacacttggtgataccaaggaaagaacaatatggcgatcaaaaca aaacattgactttgcattcatgatgctctatagtagaaaattgtcttattattatatgcaactagaagatgacgtcataa gtgctaacaattatttgcgagggattcggaaatttatagatttacaaaagaacaaattttgggcttgtctggaagtatca aaattaggcttcattggcaaaatattcaagacaagtcatttaccaaagttttcgtcattctttttagccttttatgaaac ttttccgtgtgatgtcttacttggacgagtgtattctcttctaggtcaaaagaaacctttgcattccccagaaagtctgt ttcaacatattggaaaagtatcctcattaaaacacaaaatcatgccatccattgatcaaaatttcaaattcataggccaa tcaaaattggctgtagcggaagttccaaaaggggacaatcctcccgcaatcattcgaacaaatatgaaagccatggagaa caatcgacttccggaacatgcgtactcgaactcgtcgtcgtattttaaagttaggacaccaagaaaggattcgttttata ctatattattccggaaaccacaaagggttcaaaggattgttgtttcaacaggagatgataccacaaaaaaggacatcttg aattacggagacgtatacattggtgaatttcaaactcgaacgccagcgtgtaagaacacaaggaaagctggtccttttgt tgatggattctttgattcatttttgcaaggatttaaactgccaaaatttcttatttgtattaccataagaccaaggcgga ctcaatcttcaccttgtatattccgtgaaatatctgttgtgttgaaaaaatga |
|
Protein
| Protein ID | pfu_aug2.0_529.1_30869.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_529.1_30869.t1 MIDDGNSIRGLWQGQLFDYPDILFASNETEENVTEELPWLQMGKPTHESIVVPPLLVDGVEKYVGYAKNQSLKYGNHVTD RVYLSIGIPTVSRAWGNENYLFKTLESLIANSSPEDLTRMVFVVFMADFNNTWNEVSAKNLRKRYFDLCENGTIQIVTVP CGIYPDFSQLNGTLGDTKERTIWRSKQNIDFAFMMLYSRKLSYYYMQLEDDVISANNYLRGIRKFIDLQKNKFWACLEVS KLGFIGKIFKTSHLPKFSSFFLAFYETFPCDVLLGRVYSLLGQKKPLHSPESLFQHIGKVSSLKHKIMPSIDQNFKFIGQ SKLAVAEVPKGDNPPAIIRTNMKAMENNRLPEHAYSNSSSYFKVRTPRKDSFYTILFRKPQRVQRIVVSTGDDTTKKDIL NYGDVYIGEFQTRTPACKNTRKAGPFVDGFFDSFLQGFKLPKFLICITIRPRRTQSSPCIFREISVVLKK |
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