Gene
| Gene Model ID | pfu_aug2.0_529.1_30870 |
|---|---|
| Locus | scaffold529.1 : 150316 ... 173489 : + |
| To GenomeBrowser | scaffold529.1:150316..173489 |
| Genes list of scaffold | scaffold529.1 |
| Synonym | pfu_aug1.0_19255.1_25786 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_529.1_30870.t1 | 1 | 1 | RCC1 | 39 | 87 | 1.5e-08 | 34.7 | 4.7e-12 | 3.5e-08 | 33.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_529.1_30870.t1 | gi|729755456|ref|XP_010574493.1| | PREDICTED: regulator of chromosome condensation [Haliaeetus leucocephalus] | 3.0e-18 |
| pfu_aug2.0_529.1_30870.t1 | gi|723575214|ref|XP_010307617.1| | PREDICTED: regulator of chromosome condensation [Balearica regulorum gibbericeps] | 5.0e-18 |
| pfu_aug2.0_529.1_30870.t1 | gi|723135516|ref|XP_010284384.1| | PREDICTED: regulator of chromosome condensation [Phaethon lepturus] | 5.0e-18 |
| pfu_aug2.0_529.1_30870.t1 | gi|700435074|ref|XP_009956520.1| | PREDICTED: regulator of chromosome condensation, partial [Leptosomus discolor] | 6.0e-18 |
| pfu_aug2.0_529.1_30870.t1 | gi|704324679|ref|XP_010170222.1| | PREDICTED: regulator of chromosome condensation [Caprimulgus carolinensis] | 7.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_529.1_30870.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_529.1_30870.t1 atgcctggaagaggacaaaaaagagcaaggaaaagttcaattgatgaaaaagaaaatgtctccagaaagaaacaaaaaat tacacatagttcacatcctgaccttactgaacatggattagtattgacatgtggggaaggcgacgtaggacagttaggcc tcggtgaagaaatcttcgagaggagtcggccggcaaaagttgacgtagctggagaagacattgtatccgtggtggccggt ggcatgcataccgtttgtctcaccaataaaggagagaagctgagcatgaaagtcataatgcatcccaacctggcatcttc acagatacgaaggtcacatgataaaagattttggtaccatctgaaagatattggcacaaagagcactcatgccaaatacg acagtcaggtgatgcactttagtaatatgaagtgtaccttcgggcctctggtatgcacacgaaaacaatccttgctcaag gactatacagtaagtatgacccatgttcaagtttttcaaatgtatatgtcagaagactacggtcttggccacaagaccaa actttggtaccaacagaagaacggtgcagcggttattacttatgttcaaatctgcccaagactaagcgatctaccatatt tcatcatgaccaaacttgctctaaaatatccaagaccaattcctgtatcacatcacatctcaatattttattcgttgaaa gaagaggacattgaaaatgggagacagacaggcagtcagacggactggcacacctatcttaaggggtttccatcaggctt tcttttacttttaggtatacaacgtacatgtgatgaacaaaggacgcttgagtactacaaacggagatgtatgggaaaga aggacaaagccatttcctatcgaacgtgcgactctgtgagcgtactgtacaacgttgagcaagccaagtcatactggcac aaagtaaaggaaaccaagtcgttctgctgtcactggcagtggtgctgtgagacgtgtgttcttatgataacacagttgga gaaaatcggaaatgaagacaggaaagctatggaaagcaggagcagaattggttctatgcttgatagcatcctaagtccca agcgaggaggaaaccaggtccctgtggtatctggtagtgacgtagcttcaaccggtcacggtacaagggatatcatggtg acatga |
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Protein
| Protein ID | pfu_aug2.0_529.1_30870.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_529.1_30870.t1 MPGRGQKRARKSSIDEKENVSRKKQKITHSSHPDLTEHGLVLTCGEGDVGQLGLGEEIFERSRPAKVDVAGEDIVSVVAG GMHTVCLTNKGEKLSMKVIMHPNLASSQIRRSHDKRFWYHLKDIGTKSTHAKYDSQVMHFSNMKCTFGPLVCTRKQSLLK DYTVSMTHVQVFQMYMSEDYGLGHKTKLWYQQKNGAAVITYVQICPRLSDLPYFIMTKLALKYPRPIPVSHHISIFYSLK EEDIENGRQTGSQTDWHTYLKGFPSGFLLLLGIQRTCDEQRTLEYYKRRCMGKKDKAISYRTCDSVSVLYNVEQAKSYWH KVKETKSFCCHWQWCCETCVLMITQLEKIGNEDRKAMESRSRIGSMLDSILSPKRGGNQVPVVSGSDVASTGHGTRDIMV T |
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