Gene
| Gene Model ID | pfu_aug2.0_530.1_00844 |
|---|---|
| Locus | scaffold530.1 : 26873 ... 44375 : - |
| To GenomeBrowser | scaffold530.1:26873..44375 |
| Genes list of scaffold | scaffold530.1 |
| Synonym | pfu_aug1.0_18496.1_11136 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_530.1_00844.t1 | 3 | 1 | ATS3 | 54 | 147 | 2.9e-09 | 36.5 | 0.019 | 140.0 | 2.0 |
| pfu_aug2.0_530.1_00844.t1 | 4 | 1 | PLAT | 57 | 164 | 0.0 | 181.9 | 6.0e-18 | 4.4e-14 | 52.8 |
| pfu_aug2.0_530.1_00844.t1 | 3 | 2 | ATS3 | 177 | 291 | 2.9e-09 | 36.5 | 6.6e-07 | 0.0049 | 16.4 |
| pfu_aug2.0_530.1_00844.t1 | 4 | 2 | PLAT | 185 | 292 | 0.0 | 181.9 | 1.7e-23 | 1.3e-19 | 70.6 |
| pfu_aug2.0_530.1_00844.t1 | 3 | 3 | ATS3 | 312 | 404 | 2.9e-09 | 36.5 | 3.5e-06 | 0.026 | 14.1 |
| pfu_aug2.0_530.1_00844.t1 | 4 | 3 | PLAT | 319 | 406 | 0.0 | 181.9 | 8.0e-17 | 5.9e-13 | 49.1 |
| pfu_aug2.0_530.1_00844.t1 | 4 | 4 | PLAT | 542 | 560 | 0.0 | 181.9 | 0.00075 | 5.6 | 7.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_530.1_00844.t1 | gi|676481889|ref|XP_009062522.1| | hypothetical protein LOTGIDRAFT_166832 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_530.1_00844.t1 | gi|524867967|ref|XP_005090790.1| | PREDICTED: lipoxygenase homology domain-containing protein 1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_530.1_00844.t1 | gi|524867965|ref|XP_005090789.1| | PREDICTED: lipoxygenase homology domain-containing protein 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_530.1_00844.t1 | gi|390357847|ref|XP_001179510.2| | 0.0 | |
| pfu_aug2.0_530.1_00844.t1 | gi|585679891|ref|XP_006819602.1| | PREDICTED: lipoxygenase homology domain-containing protein 1-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_530.1_00844.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_530.1_00844.t1 atgaatttcaaagacaaagtgaacttatatgttgcggatttagaggggggagaggactccaggccaaaaagaccagccag tgccaaaccaaggatagagtacatagcccctaagccacatgtcaaacgtaaagaggaggaggaagaaaaagtcataccgg agagactgtataaagtagaggtgtttacaggggacatcaacggagcaggaaccgcagctaatgtgttcattacaattaaa ggcagcagagatatactcaacaagaccaagttaatgaaaggcagaggctcggctcagtttgccttcttaaggaatacaaa agaaactttttatttgaaggcaccaaagctgggaaaccctgaaatagtgacaatagagcatgatgggttagagaagaagc atggatggtacttagagaggatagagattacggatatggagactagtatggtttggatattctggtgtaagaactggttg tcactacatataaaggattaccagataagtcgggacctgtatgggaaggagaaagaaatgcctcagtgtgcctacgaaat tgaggtcatcactggaaagaaaaagctagcaggaacagatgctaaagtttaccttaccatgtttggtgctaatggaccaa ccaagaaaatactactggctgataggagcaaaaacaaggaggcatttgagcgtggtagaacagaccatttcagacttctt atgaatgatattggggaacttaaacgcatcagaattgaacatgatggtgaaggctttgcatcaggctggtacttagagag gattacaataaccaaagagcttgagcgcaaagagatttattattttccgtatggaggatggatagctagggatgctggga aaggagaattgttcagagaaatcaaggcgcggaaaacattgcctcgagagatggagacaggtgaaaccacaacatatatt gtgacagtgttaacaggggatgtgaggtatgcaggtactgatgccaacgtgtttatcaagttctgtggtgtcaacgaaaa gtctaccaagaaactcaagctagatgatgccaaaaacaactttgagaggggtatgacagatgaatttaagttagaatcta tagatgttgggccaatatcatacattgtgataggacatgacaactcaggacccggtgctggatggttcttagaccaggtt aaagtgaagagatatcttgggaagaaagaaatcaaggagtacatgaagaaagcaaagaaaaagtaccaagctgaggacaa agtaggtgatgatcgtcctgcaagtgggtcacgacgaccttcaagtgccaaaggtcgcgatcgtaatcggccaactagtg caatgtcaaacagaaaagacaagaggaataaaacatatcatgatgatgattcagatgaagatttaagtgacccagattcc gacctcagtgacagggtagataactcttccagaccccgatcaagtcttggaaggagtttaaggaggggacttgatctgtc agatattgaggaggatagcgagggagaaaagaaacagaaaagggggaaaagagggaaaggagacagaaagagggaaaaat atgatgtggtagctacattgcaaaaacctttatatgaggaatatttgtttccatgtaatcagtggttcgcttctgatgaa ggtgatggtttgtttgtaagggaaattaaatacagaaataaagagatgttcttcagggattga |
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Protein
| Protein ID | pfu_aug2.0_530.1_00844.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_530.1_00844.t1 MNFKDKVNLYVADLEGGEDSRPKRPASAKPRIEYIAPKPHVKRKEEEEEKVIPERLYKVEVFTGDINGAGTAANVFITIK GSRDILNKTKLMKGRGSAQFAFLRNTKETFYLKAPKLGNPEIVTIEHDGLEKKHGWYLERIEITDMETSMVWIFWCKNWL SLHIKDYQISRDLYGKEKEMPQCAYEIEVITGKKKLAGTDAKVYLTMFGANGPTKKILLADRSKNKEAFERGRTDHFRLL MNDIGELKRIRIEHDGEGFASGWYLERITITKELERKEIYYFPYGGWIARDAGKGELFREIKARKTLPREMETGETTTYI VTVLTGDVRYAGTDANVFIKFCGVNEKSTKKLKLDDAKNNFERGMTDEFKLESIDVGPISYIVIGHDNSGPGAGWFLDQV KVKRYLGKKEIKEYMKKAKKKYQAEDKVGDDRPASGSRRPSSAKGRDRNRPTSAMSNRKDKRNKTYHDDDSDEDLSDPDS DLSDRVDNSSRPRSSLGRSLRRGLDLSDIEEDSEGEKKQKRGKRGKGDRKREKYDVVATLQKPLYEEYLFPCNQWFASDE GDGLFVREIKYRNKEMFFRD |
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