Gene
| Gene Model ID | pfu_aug2.0_530.1_00845 |
|---|---|
| Locus | scaffold530.1 : 67596 ... 90578 : + |
| To GenomeBrowser | scaffold530.1:67596..90578 |
| Genes list of scaffold | scaffold530.1 |
| Synonym | pfu_aug1.0_34.1_43434 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| estrogen-related receptor gamma-like isoform x2 | GO:0009987 GO:0097159 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_530.1_00845.t1 | 1 | 1 | zf-C4 | 101 | 168 | 2.3e-31 | 107.8 | 6.1e-35 | 4.5e-31 | 106.8 |
| pfu_aug2.0_530.1_00845.t1 | 1 | 1 | Hormone_recep | 233 | 413 | 1.7e-30 | 105.6 | 3.5e-34 | 2.6e-30 | 105.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_530.1_00845.t1 | gi|410916275|ref|XP_003971612.1| | 0.0 | |
| pfu_aug2.0_530.1_00845.t1 | gi|657752029|ref|XP_008311472.1| | PREDICTED: estrogen-related receptor gamma-like isoform X2 [Cynoglossus semilaevis] | 0.0 |
| pfu_aug2.0_530.1_00845.t1 | gi|734619551|ref|XP_010737582.1| | PREDICTED: estrogen-related receptor gamma [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_530.1_00845.t1 | gi|542219453|ref|XP_005449660.1| | PREDICTED: estrogen-related receptor gamma-like isoform X4 [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_530.1_00845.t1 | gi|657752027|ref|XP_008311471.1| | PREDICTED: estrogen-related receptor gamma-like isoform X1 [Cynoglossus semilaevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_530.1_00845.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_530.1_00845.t1 atggatgtagataccataaaggtggagccggggagtccgttaggactggggaaatgttcccagctatccctggacgagag cttcgggagggacgtgttccaggattataactatgacgattatggttcagacggctcataccaaggcaacagtgccgaca acagcggcaacatctcaccctgcagcattgacaacgtctcccccatagagagcgcccagatcgacttcattaacagtata tctagcagtctctctagctctttttcgtgtgacaatgacaatagtgacgcacccaagcgtctgtgtttagtgtgtggaga tattgcgtctgggtaccactatggcgtctcgtcatgtgaggcatgcaaagccttcttcaagcgtacaatccaagggaaca tcgagtactcatgccctgccaacagcgattgtgagattaccaaaaggcgcaggaaggcatgtcaagcctgcaggttccag aaatgtctcggtgtgggcatgctcagagaaggtgttcgtttggacagagttagaggcggcagacagaagtacaagaggag tcctgattctcagttaattgtacaacagatattccctatgatcaaaaaggcatgtgttgaaggagtaatagagaataaga tattgtcccagttactgagtatagagacacagcttgataagttatatgtcagtacagatcaagatacggatgaagacgac ctacgattcctagctacagtctcagatttagccgacagagaattggtcatcactataagctgggcaaagcaggttccagg tttttgtaccttatcactgatagatcagatgaatctattacaacactcatggttagagattctctgcttgaaccttgtat ttcgctcatgtccctacaatggctacctcaagtttgccgaggatcttcagttgtcggtggaagacgctaaaatgtgccaa tgttcaccagagcttgacagcctgtccagaaaacttgccaaaaaattcacaaacatgggtgtcacaaaggaagaatatct cctactcaaagccatgactttgtgtaacactgacatactgattgaaaacaatgaggccgtgatgcagctacaggacaaat tacaggatgggcttatcgagtacgtaaaatctcgttacgctgggaacctacgacggcttggtcatctatatcttctactt ccctcactcaaccaaatgaaactactggcaaaacagtattggttcgacataaaaaaagatggtcgtgtcatgatgcataa actattcctcgagatgttagaggcagattcctga |
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Protein
| Protein ID | pfu_aug2.0_530.1_00845.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_530.1_00845.t1 MDVDTIKVEPGSPLGLGKCSQLSLDESFGRDVFQDYNYDDYGSDGSYQGNSADNSGNISPCSIDNVSPIESAQIDFINSI SSSLSSSFSCDNDNSDAPKRLCLVCGDIASGYHYGVSSCEACKAFFKRTIQGNIEYSCPANSDCEITKRRRKACQACRFQ KCLGVGMLREGVRLDRVRGGRQKYKRSPDSQLIVQQIFPMIKKACVEGVIENKILSQLLSIETQLDKLYVSTDQDTDEDD LRFLATVSDLADRELVITISWAKQVPGFCTLSLIDQMNLLQHSWLEILCLNLVFRSCPYNGYLKFAEDLQLSVEDAKMCQ CSPELDSLSRKLAKKFTNMGVTKEEYLLLKAMTLCNTDILIENNEAVMQLQDKLQDGLIEYVKSRYAGNLRRLGHLYLLL PSLNQMKLLAKQYWFDIKKDGRVMMHKLFLEMLEADS |
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