Gene
| Gene Model ID | pfu_aug2.0_530.1_00847 |
|---|---|
| Locus | scaffold530.1 : 151846 ... 166827 : + |
| To GenomeBrowser | scaffold530.1:151846..166827 |
| Genes list of scaffold | scaffold530.1 |
| Synonym | pfu_aug1.0_6849.1_38419 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_530.1_00847.t1 | 1 | 1 | C1q | 26 | 149 | 8.7e-21 | 74.2 | 7.4e-25 | 1.1e-20 | 73.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_530.1_00847.t1 | gi|597749800|ref|XP_007236826.1| | PREDICTED: complement C1q-like protein 2-like [Astyanax mexicanus] | 1.0e-11 |
| pfu_aug2.0_530.1_00847.t1 | gi|292621117|ref|XP_001336467.3| | PREDICTED: complement C1q-like protein 2 [Danio rerio] | 7.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_530.1_00847.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_530.1_00847.t1 atgatgttcctaatattgattgcctgtgtgactgtatcagcagctgtactttaccctaccagcagccaaaaaatagcgtt cactgcgtacaacaagcataccataccatttttgacgcacaatggaatagtgtgcctaaaaagtacttacatcaacgaag ggggtgcctacgacctgaatacttgtaaattcactgctccaagagatggcatttacaagtttgaatggaattttctgacg aagcctggacatctattcatatcagctttggtacgcaatggaaagataatagcttacaaccatgctggggaccatcaaaa caaaaactgggacagttccacccagtctgtattcctacgtctgacaaaaggcgaacaggtatggatccaagcaagaggcg gagatgggcgttacctctacggggatacatactcaaccttcagcggtcagagtatctaa |
|
Protein
| Protein ID | pfu_aug2.0_530.1_00847.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_530.1_00847.t1 MMFLILIACVTVSAAVLYPTSSQKIAFTAYNKHTIPFLTHNGIVCLKSTYINEGGAYDLNTCKFTAPRDGIYKFEWNFLT KPGHLFISALVRNGKIIAYNHAGDHQNKNWDSSTQSVFLRLTKGEQVWIQARGGDGRYLYGDTYSTFSGQSI |
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