Gene
| Gene Model ID | pfu_aug2.0_530.1_00850 |
|---|---|
| Locus | scaffold530.1 : 212255 ... 243703 : - |
| To GenomeBrowser | scaffold530.1:212255..243703 |
| Genes list of scaffold | scaffold530.1 |
| Synonym | pfu_aug1.0_6849.1_38414 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_530.1_00850.t1 | 2 | 1 | fn3 | 19 | 54 | 1.0e-07 | 31.9 | 9.2e-05 | 0.34 | 11.0 |
| pfu_aug2.0_530.1_00850.t1 | 2 | 1 | CUB | 89 | 180 | 1.1e-26 | 93.0 | 3.8e-13 | 1.4e-09 | 37.9 |
| pfu_aug2.0_530.1_00850.t1 | 2 | 2 | fn3 | 192 | 226 | 1.0e-07 | 31.9 | 3.0e-07 | 0.0011 | 19.0 |
| pfu_aug2.0_530.1_00850.t1 | 2 | 2 | CUB | 296 | 387 | 1.1e-26 | 93.0 | 1.3e-17 | 5.0e-14 | 52.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_530.1_00850.t1 | gi|585692556|ref|XP_006821475.1| | PREDICTED: uncharacterized protein LOC102807629 [Saccoglossus kowalevskii] | 3.0e-08 |
| pfu_aug2.0_530.1_00850.t1 | gi|195448629|ref|XP_002071743.1| | GK10140 [Drosophila willistoni] | 3.0e-08 |
| pfu_aug2.0_530.1_00850.t1 | gi|699674420|ref|XP_009885415.1| | PREDICTED: cubilin [Charadrius vociferus] | 8.0e-08 |
| pfu_aug2.0_530.1_00850.t1 | gi|705672600|ref|XP_010115635.1| | PREDICTED: cubilin-like, partial [Chlamydotis macqueenii] | 8.0e-08 |
| pfu_aug2.0_530.1_00850.t1 | gi|677617303|ref|XP_009070438.1| | PREDICTED: cubilin-like, partial [Acanthisitta chloris] | 8.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_530.1_00850.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_530.1_00850.t1 atggatgagactatgttaacgatatctctgatgaccacaggtctctcacctcctgatccaccaagaaatgttgaagttca tcgacaaaacagaagatttgctgtcacatgggatgttcccgcacatgcgtatggcaacttaacacgctatgtggtgacct ccattttactaccagaaggaaataggacgtatctacgcttacctccaaccagtccaatagcatttatttcatgcggtttc aaagtctttatttcaccaggactgacagaaacaatatcttctccaaactacccatggtcttatgagcctggagtactctg tgaatgggatatacaaacaaacagcacacatgtgctttctcttgaattcgagaccatagattttggagagaatgagcatt gtaaagcagctggactatatgttactgttggtcaaagtgtgaggaatttttgtgacccacataaaagtgtaacattaaca gaaagttacgcaaagatgacatttagaacgaaatcagttggaagagggaaaggattaaggatgaatataaaaaccagagt aaaatcacctggtccaccttccaacgttacggtaaaaagcaccaaatcatccatacacgttaattggcagcctccaacgg gaaatctacttccggtaacgtcatacaaattagagtacacttttcttccatccataaggagagtgatatttcttccgcct catatgctgtggttcagtatcaacactaagggttttgaaggtcgcatgatttctttacaaatcaaagcattcatcaaaga cttggagggggaacctgccggaccaatttatgcaagagcaaattgtataacagagataaatataagtgatataggacaga tttacaatataacttcaccaaactatccttccccgtacccaccaggcgtagtgtgtaattggaggatacggaatccgtac agctaccgagtggttctaaatgtaaaatggatggatatacaaagaacattactgtgcaatggagattttgtgtcgttttc tgtaaacgggaatgcacatgaatgtggacatgtaaatgaccatatcatcaaaacgaggaacacgtttatctttataactt tcaaatctgactttgatgtccagagatctggattttatgttcaagtctttacaatatatgacaagacttcagctgtgata accacaacgagccatacagaacaaacaagcataaagccatctcatcatgtgtctactaccatagataataatactccatt atacattactgcatctagaatttctacagcttctatccattcgtatccatcacaaactatcgtcacgtcatttcctgaaa atatatcattttattcaactccacctcgattaatgtcaaacagcataggaacgtcatcagaccgaactatggcatcatct tcagtggtttctactttaacacatatttcaacagcaagcacttacattggcaaacatatacagacaactacaataagccc atctggatccgctacttcatcagaacctgtttattcatctcggattacgtcttcgaaaaggtctacgacaacaaactttc gcacaacgttgtcaacaattcagacgccacatacaactatcaaggcatatggtgacgtaaccttccctttacatctcgtg tttggattgagacagagggaccctacagtcagagccggaagcttaccagtcagtaaatccattctttctagaagtttgca gaatattttcaacaaaagtggtctttattctggtctttttatagacagattaagattgagaaaaagcataatagttgccg atgtaaccgtgaatttcaatgtaaaagccgttttacaaagacagaaaacagacaaagctttcaaccttgttacctacgta aataaaacattccttgaacatatctctgatgctccaattgcttcaagcctttggaagtatgacgatgaatctattgatga ttttagaaactcctcaatatttaaagagcaggagatcaaatcaaagtgtgattacgtaacaacttgttctgcaaattact tttgcgttgaaaggagtacatcaacttgtggtattctttgctgttcttttgatatagccaagtgttcaaataactgttct gtgatcaacatgatgtcatgtctgattaacgatagtcagcaatatgtgcctgatgaagtgaccatcaacaactatgacat cataatcattgccctgtctgtatctgttgtgtgtatagtaggagctgttgtttgtgttgtactgagatttagatatactg caaagaagaggtccatccgagtacagaatgcacaaaacaatatagagctgcacgatattctacaaagcaatttcattggt ggcaaaaatattgaattcacagcattttcccgtcatcggagttcacgaagacaggacggaaaattacaggtacctggatt atcaaatggacatagcaatggatcatcatcaggttctgaggaagttgtgcctgccaatggacacccaaacacttctctaa aaagacaacataattcggtttccaacaagagggatgtgcacacaaatgacaagattttacagctgcagaaattactgtcg attatcggaaatgataaggttaataaacgagagccctctattgacagtgccaaagaaagtgagatggaaaataaaggggc agataactccaatcttaatatcaaacttacagatgaagatataagggctttgaagttactaaaagccaagttagagagac agaggggtaacaacgatcagcgtattgttgacaagattaactcggataataaagccaaaccaacacctaccatgggatca ttttatgaacaagaattaaacgaggatgaattgagacaacagcaggtagacaggatcaaacagcttgccagcgccatctt gaaaagtgatcgtcgggatgttgacacttccggcagcgagaaatcaaaagcagtcgtcaatccaaaggaaggaacttttg gcaatttcagaattgaagtcttacataagttagaagaacggttattacaagatgtagatctggcattaaggagtggattc accctggatgagatcatggccgatttggagaaagaagaatcagaggacattcagaaggaacgacgaaaagaaaatattaa gagcagactactcaccttactgttgaaaggggataaaccatga |
|
Protein
| Protein ID | pfu_aug2.0_530.1_00850.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_530.1_00850.t1 MDETMLTISLMTTGLSPPDPPRNVEVHRQNRRFAVTWDVPAHAYGNLTRYVVTSILLPEGNRTYLRLPPTSPIAFISCGF KVFISPGLTETISSPNYPWSYEPGVLCEWDIQTNSTHVLSLEFETIDFGENEHCKAAGLYVTVGQSVRNFCDPHKSVTLT ESYAKMTFRTKSVGRGKGLRMNIKTRVKSPGPPSNVTVKSTKSSIHVNWQPPTGNLLPVTSYKLEYTFLPSIRRVIFLPP HMLWFSINTKGFEGRMISLQIKAFIKDLEGEPAGPIYARANCITEINISDIGQIYNITSPNYPSPYPPGVVCNWRIRNPY SYRVVLNVKWMDIQRTLLCNGDFVSFSVNGNAHECGHVNDHIIKTRNTFIFITFKSDFDVQRSGFYVQVFTIYDKTSAVI TTTSHTEQTSIKPSHHVSTTIDNNTPLYITASRISTASIHSYPSQTIVTSFPENISFYSTPPRLMSNSIGTSSDRTMASS SVVSTLTHISTASTYIGKHIQTTTISPSGSATSSEPVYSSRITSSKRSTTTNFRTTLSTIQTPHTTIKAYGDVTFPLHLV FGLRQRDPTVRAGSLPVSKSILSRSLQNIFNKSGLYSGLFIDRLRLRKSIIVADVTVNFNVKAVLQRQKTDKAFNLVTYV NKTFLEHISDAPIASSLWKYDDESIDDFRNSSIFKEQEIKSKCDYVTTCSANYFCVERSTSTCGILCCSFDIAKCSNNCS VINMMSCLINDSQQYVPDEVTINNYDIIIIALSVSVVCIVGAVVCVVLRFRYTAKKRSIRVQNAQNNIELHDILQSNFIG GKNIEFTAFSRHRSSRRQDGKLQVPGLSNGHSNGSSSGSEEVVPANGHPNTSLKRQHNSVSNKRDVHTNDKILQLQKLLS IIGNDKVNKREPSIDSAKESEMENKGADNSNLNIKLTDEDIRALKLLKAKLERQRGNNDQRIVDKINSDNKAKPTPTMGS FYEQELNEDELRQQQVDRIKQLASAILKSDRRDVDTSGSEKSKAVVNPKEGTFGNFRIEVLHKLEERLLQDVDLALRSGF TLDEIMADLEKEESEDIQKERRKENIKSRLLTLLLKGDKP |
|