Gene
| Gene Model ID | pfu_aug2.0_530.1_00852 |
|---|---|
| Locus | scaffold530.1 : 256574 ... 273010 : + |
| To GenomeBrowser | scaffold530.1:256574..273010 |
| Genes list of scaffold | scaffold530.1 |
| Synonym | pfu_aug1.0_955.1_29501 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| adp-ribosylation factor 1 | GO:0003924 GO:0005525 GO:0005795 GO:0006471 GO:0006886 GO:0006892 GO:0007155 GO:0007269 GO:0008360 GO:0010883 GO:0016197 GO:0032011 GO:0045807 GO:0048488 GO:0048749 GO:1902036 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_530.1_00852.t1 | 2 | 1 | Arf | 1 | 21 | 0.0 | 205.3 | 9.8e-06 | 0.021 | 14.0 |
| pfu_aug2.0_530.1_00852.t1 | 2 | 1 | Miro | 8 | 22 | 8.4e-06 | 26.2 | 0.49 | 1000.0 | 0.1 |
| pfu_aug2.0_530.1_00852.t1 | 1 | 1 | Ras | 15 | 140 | 1.1e-08 | 34.6 | 5.5e-12 | 1.2e-08 | 34.5 |
| pfu_aug2.0_530.1_00852.t1 | 1 | 1 | SRPRB | 18 | 119 | 1.6e-07 | 30.7 | 9.4e-11 | 2.0e-07 | 30.4 |
| pfu_aug2.0_530.1_00852.t1 | 1 | 1 | G-alpha | 20 | 105 | 1.6e-08 | 33.6 | 1.1e-11 | 2.3e-08 | 33.1 |
| pfu_aug2.0_530.1_00852.t1 | 2 | 2 | Miro | 23 | 105 | 8.4e-06 | 26.2 | 1.3e-08 | 2.7e-05 | 24.6 |
| pfu_aug2.0_530.1_00852.t1 | 2 | 2 | Arf | 26 | 152 | 0.0 | 205.3 | 0.0 | 0.0 | 190.9 |
| pfu_aug2.0_530.1_00852.t1 | 1 | 1 | Gtr1_RagA | 31 | 118 | 5.6e-07 | 28.9 | 3.1e-10 | 6.6e-07 | 28.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_530.1_00852.t1 | gi|156387456|ref|XP_001634219.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_530.1_00852.t1 | gi|148298726|ref|NP_001091755.1| | ADP-ribosylation factor [Bombyx mori] | 0.0 |
| pfu_aug2.0_530.1_00852.t1 | gi|675885376|ref|XP_009028190.1| | hypothetical protein HELRODRAFT_186077 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_530.1_00852.t1 | gi|66549728|ref|XP_392990.2| | PREDICTED: ADP-ribosylation factor 1-like isoformX1 [Apis mellifera] | 0.0 |
| pfu_aug2.0_530.1_00852.t1 | gi|17136866|ref|NP_476955.1| | ADP ribosylation factor at 79F, isoform B [Drosophila melanogaster] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_530.1_00852.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_530.1_00852.t1 atgttaaacgaagatgaattacgagacgctgtgttactagtctttgcaaataaacagaacaagactagcatttactgatt taatgtagagacagtagagtataagaatattagttttacggtgtgggacgtaggagggcaggataaaattcgtccattgt ggagacattacttccaaaacacacaaggtcttatatttgtggttgatagtaacgacagagaaagagtaggagaagctcga gaagagctgaacagaatgttaaacgaagatgaattacgagacgctgtgttactagtctttgcaaataaacaggatttacc gaatgcaatgaatgctgcagaaattacagataaattgggacttcattctctacgaaatagaaactggtatattcaagcaa cttgtgccacttctggggacggactgtatgaaggcctagactggatgtctaatacgctcaaaaatttaaaatag |
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Protein
| Protein ID | pfu_aug2.0_530.1_00852.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_530.1_00852.t1 MLNEDELRDAVLLVFANKQNKTSIYXFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAR EELNRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWMSNTLKNLK |
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