Gene
| Gene Model ID | pfu_aug2.0_5317.1_26058 |
|---|---|
| Locus | scaffold5317.1 : 3386 ... 11622 : + |
| To GenomeBrowser | scaffold5317.1:3386..11622 |
| Genes list of scaffold | scaffold5317.1 |
| Synonym | pfu_aug1.0_10.1_21911 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5317.1_26058.t1 | 1 | 1 | PUB | 16 | 85 | 4.0e-19 | 68.1 | 5.0e-22 | 1.1e-18 | 66.8 |
| pfu_aug2.0_5317.1_26058.t1 | 2 | 1 | Transglut_core | 266 | 340 | 1.2e-13 | 51.2 | 1.3e-16 | 2.9e-13 | 50.0 |
| pfu_aug2.0_5317.1_26058.t1 | 1 | 1 | Rad4 | 322 | 401 | 1.5e-11 | 43.8 | 1.9e-14 | 4.1e-11 | 42.4 |
| pfu_aug2.0_5317.1_26058.t1 | 2 | 2 | Transglut_core | 508 | 530 | 1.2e-13 | 51.2 | 1.5 | 3100.0 | -1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5317.1_26058.t1 | gi|676429771|ref|XP_009045709.1| | hypothetical protein LOTGIDRAFT_237618 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_5317.1_26058.t1 | gi|632955908|ref|XP_007893697.1| | PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_5317.1_26058.t1 | gi|658873047|ref|XP_008419477.1| | PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform X2 [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_5317.1_26058.t1 | gi|551506061|ref|XP_005804563.1| | PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase-like [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_5317.1_26058.t1 | gi|658873045|ref|XP_008419476.1| | PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform X1 [Poecilia reticulata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5317.1_26058.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5317.1_26058.t1 atggcagttgctttcgcttcgttacatcaacttctcaacgaaaatgacagcacacagttcgtcgaagctgcaaaaatact tctgaagtttgcagacaacattcttaaaaatccaaatgaacccaaatatcgccggattaggcttgggaatcaaactgtag aaagcaaacttttaccagtctccggagcattggaatgtctttttgaaatgggctttcaagaggatggagaatatttaacg ttacaccaaggatcacccctgtcatcactgcagtacataaggaacaaattggatgctgagttaacaaagttacagaggac cagcaatggaccaacttcctcacgtaccctttctaattcagcaccatcaataccagctgctacaactgtcagccaattac aacctagaccaataaatcctctgcaaaacttctcccagcagcagatatttcaaatggagcaacgtttctttcaaaagata caatcaaatttagttcacgtcttgatgtatgaagatccaagtatccagctgaaggcacgttcaatcattccagtagaagc cttgaagaaagcagctcatgaaaaactagaggcaataataaaggaagacaactcttcagctcgcagtattgattttaggg acttaatgttgttagagttactggcatggtttaagaattcctttttcaaatggatggattcaccaaagtgccctcaatgc aatggaaacactaggagtgtgggtatggcacaaccgacacaggaagaactaaagtggcagggaggaagggtagagaatta taaatgtgatagatgtcaaatttttgttcgttttcctcgctacaaccatccagaaaagttgttagaaaccagatgtggta gatgtggagaatgggctaactgctttactttatgctgtagagctctgggatttgaagcacgttatgtccttgattggact gaccatgtgtggacggaggtttactcagtggtccaaaagcgctggctccattgtgatccctgtgaaaatacctgtgataa gcctttactttatgaggcagggtggggcaaaaaactgtcgtatgtactagctttctctaaagatgaggtgcaggatgtca cttggcgctactcaaacaagcatgctgaggttttgagtcgcaggaatgagtgtagagaaacctggcttgtcattataata cacaggctgtggaaggccaaggaaactatcaacagcccagataggaacaaagaaatgaaggacagacttttgacagaact ggtggaatttatgtctccaaagtcagctgacggacaaaacctctctggtaggacatcagggtcactagcctggagactag ccaggggggaaacaagccaggcctcgacaggggcggtagaaagttacgtctttaagctggctgacgaggagaagaaatca aagcttttccatctcaagtacagctgtgctaaggatgagtacactagagtttcagcagggaaggcgacagagaaaaagtt tataaaatatttacataaagtacaaaatgtattcaggaaggaggagcatgactggaagatggtttacttagctagaacag agggatcccctacagctgccgtatcatggaagtttgacttcacaggtatgacagttgatagagtagaagtaagagccagt agctgtacgtatgagaatggtgtaatatcgtggagactgtgtagcaaagataaatgtgttatgctaaatggaggagatga ccttaagtcatacgacgaccttgaatgggcagaggatatgaccttgacagctatgctaagtggtggtaaaggtgatgttg cttggcaacacactcagctcttcaggcagaaaatggacgacacagaaagttgtcctttagaaatcaaagtatattttaaa taa |
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Protein
| Protein ID | pfu_aug2.0_5317.1_26058.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5317.1_26058.t1 MAVAFASLHQLLNENDSTQFVEAAKILLKFADNILKNPNEPKYRRIRLGNQTVESKLLPVSGALECLFEMGFQEDGEYLT LHQGSPLSSLQYIRNKLDAELTKLQRTSNGPTSSRTLSNSAPSIPAATTVSQLQPRPINPLQNFSQQQIFQMEQRFFQKI QSNLVHVLMYEDPSIQLKARSIIPVEALKKAAHEKLEAIIKEDNSSARSIDFRDLMLLELLAWFKNSFFKWMDSPKCPQC NGNTRSVGMAQPTQEELKWQGGRVENYKCDRCQIFVRFPRYNHPEKLLETRCGRCGEWANCFTLCCRALGFEARYVLDWT DHVWTEVYSVVQKRWLHCDPCENTCDKPLLYEAGWGKKLSYVLAFSKDEVQDVTWRYSNKHAEVLSRRNECRETWLVIII HRLWKAKETINSPDRNKEMKDRLLTELVEFMSPKSADGQNLSGRTSGSLAWRLARGETSQASTGAVESYVFKLADEEKKS KLFHLKYSCAKDEYTRVSAGKATEKKFIKYLHKVQNVFRKEEHDWKMVYLARTEGSPTAAVSWKFDFTGMTVDRVEVRAS SCTYENGVISWRLCSKDKCVMLNGGDDLKSYDDLEWAEDMTLTAMLSGGKGDVAWQHTQLFRQKMDDTESCPLEIKVYFK |
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