Gene
| Gene Model ID | pfu_aug2.0_54.1_13493 |
|---|---|
| Locus | scaffold54.1 : 253697 ... 264474 : - |
| To GenomeBrowser | scaffold54.1:253697..264474 |
| Genes list of scaffold | scaffold54.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin thioesterase zranb1-like | GO:0016579 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_54.1_13493.t1 | 5 | 1 | zf-RanBP | 4 | 32 | 8.8e-13 | 47.1 | 1.0e-10 | 5.2e-07 | 28.6 |
| pfu_aug2.0_54.1_13493.t1 | 5 | 2 | zf-RanBP | 82 | 107 | 8.8e-13 | 47.1 | 5.0e-06 | 0.025 | 13.6 |
| pfu_aug2.0_54.1_13493.t1 | 5 | 3 | zf-RanBP | 175 | 182 | 8.8e-13 | 47.1 | 0.094 | 460.0 | 0.0 |
| pfu_aug2.0_54.1_13493.t1 | 5 | 4 | zf-RanBP | 182 | 191 | 8.8e-13 | 47.1 | 0.1 | 510.0 | -0.2 |
| pfu_aug2.0_54.1_13493.t1 | 5 | 5 | zf-RanBP | 259 | 282 | 8.8e-13 | 47.1 | 1.8e-09 | 8.9e-06 | 24.7 |
| pfu_aug2.0_54.1_13493.t1 | 1 | 1 | OTU | 530 | 675 | 8.1e-27 | 94.2 | 3.9e-30 | 2.0e-26 | 92.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_54.1_13493.t1 | gi|676462676|ref|XP_009056346.1| | hypothetical protein LOTGIDRAFT_232866 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_54.1_13493.t1 | gi|260817647|ref|XP_002603697.1| | hypothetical protein BRAFLDRAFT_115441 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_54.1_13493.t1 | gi|524912778|ref|XP_005111227.1| | PREDICTED: ubiquitin thioesterase zranb1-B-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_54.1_13493.t1 | gi|585670591|ref|XP_006817899.1| | PREDICTED: ubiquitin thioesterase ZRANB1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_54.1_13493.t1 | gi|573884795|ref|XP_006630477.1| | PREDICTED: ubiquitin thioesterase ZRANB1-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_54.1_13493.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_54.1_13493.t1 atgtcggaaggaggaaaatggtcgtgtaaagtgtgtacttatcacaacttctcagcagcagcaaaatgtactttgtgtaa tgcacccagaccatctgccaccctcatttctgacttccaaaatgaagagcaggacatctacaagatggctgccacgatgg gctccaacaaggatgctagcagcagcaccaccagtggtagtggtggggtcatttgttcgagtagcaacaatgaggcaagc aataagtggccctgcccaagctgtacatatctgaatttgtctcgagtcaatagatgtagtcagtgtcatacaacaaagaa aaagctttcatctggaaacggatcgccaaagcagtccatgaaggctaagcatcatagtgaaatgtctatagaactttcag gggaaaaaatatcagggggagcaactactactagacagacactcccaggatctccaaaggcagcaaaatcagcatcaaat aatgatattaataaaaccttaacatgcatggcatctaaagtcaaatggacatgtaaagcttgcacatgtagtcagtgtca tacaacaaagaaaaagctttcatctggaaacggatcgccaaagcagtccatgaaggctaagcatcatagtgaaatgtcta tagaactttcaggggaaaaaatatcagggggagcaactactactagacagacactcccaggatctccaaaggcagcaaaa tcagcatcaaataatgatattaataaaaccttaacatgcatggcatctaaagtcaaatggacatgtaaagcttgcacgta tgagaactggccgagggctaccaagtgtatcatgtgtggtacatacaaaggcaggggctctccagaaatcattgcctcta cgtctacgtcaccgactgaaattaagcagagcccttcattagagtttttagcctctggaggcgcaggattaatagatcaa agagacttccccaccgcttttaacaatgaggagaatcaagccaccgaaaagcgtttaaaagagatcagaaaaggtatgcg tgaagatgattggttgtggttaaatgcctgtctaggcgtggttgtgggggacattggagccatagaagcctttatcgcat ctggtggcgaccctgcccggcagcttactcaagaggaggtgactctccttaacagacctagcgcttttgaggttggctac acaatcgtacaccttgccatcagatttaagcgcgatgacatgctggcagtactgttgacaagtacagagtctaatgccaa gggattgaagcgtttaccatcacatatcactcctgacctggctgcagagatacgcagggaaatctcatccattttcaggc agagaaaaggtggaaaaggagaatttgcttgccagtttctatcagactgtgttacctttgctttaccagcaggtgtatca gacttgcctcttagtgtccagtcacagctgttagatgagatatcagataaagatgttcaaaaggaacttgaagaggagct ggtaatcaactggagccatgagctgagggaccgtcttggaagtagactttacgcactgtggaacagaactgctggggact gtctcctggattctgtactacaagctacatgggccatatttgattccgataacacgttaagacatgctctatctgaaagt attaatgatggtgctatgacattctacccacggtggaaggaatatgaatctatgcatgctgatatgctgcatttctcgct ggacgagacccagtggcagagtgattgggcagagctacttagcttggctagcaaacctggtgcttcattagaacagactc acatttttgccttggctcatattctacgtaggcctataattgtgtatggagtaaagtatttcaaaagctttagaggagaa actttgggatttgttagatttcaaggtgtatacttgcctttactatgggagcaggggttttgctggaagtctccgatagc gttagcctacacacggggtcatttctccgccctcatcgcccaggagatggacactgatatcggggccggggcaggagctc cactcgagacaaacgaggatgaccaggtcgtttatcttccgctagtggactacgaggggaaacttttaccgatacctttc ctaactgcatcagaggttgggagagaggaaagtttacttcaggaatggttggattgtgtagttaccaaaggtggctgtct ggtggctctacagaagttaggaaagcggcccacgatggtcaaacaaatggttgacgagtggctggaccactatcgacaga tctcacatatggccacagcgccatctactgggcttcagggtcaaaacttctccagtgacggagaaagcgatcaagagtga |
|
Protein
| Protein ID | pfu_aug2.0_54.1_13493.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_54.1_13493.t1 MSEGGKWSCKVCTYHNFSAAAKCTLCNAPRPSATLISDFQNEEQDIYKMAATMGSNKDASSSTTSGSGGVICSSSNNEAS NKWPCPSCTYLNLSRVNRCSQCHTTKKKLSSGNGSPKQSMKAKHHSEMSIELSGEKISGGATTTRQTLPGSPKAAKSASN NDINKTLTCMASKVKWTCKACTCSQCHTTKKKLSSGNGSPKQSMKAKHHSEMSIELSGEKISGGATTTRQTLPGSPKAAK SASNNDINKTLTCMASKVKWTCKACTYENWPRATKCIMCGTYKGRGSPEIIASTSTSPTEIKQSPSLEFLASGGAGLIDQ RDFPTAFNNEENQATEKRLKEIRKGMREDDWLWLNACLGVVVGDIGAIEAFIASGGDPARQLTQEEVTLLNRPSAFEVGY TIVHLAIRFKRDDMLAVLLTSTESNAKGLKRLPSHITPDLAAEIRREISSIFRQRKGGKGEFACQFLSDCVTFALPAGVS DLPLSVQSQLLDEISDKDVQKELEEELVINWSHELRDRLGSRLYALWNRTAGDCLLDSVLQATWAIFDSDNTLRHALSES INDGAMTFYPRWKEYESMHADMLHFSLDETQWQSDWAELLSLASKPGASLEQTHIFALAHILRRPIIVYGVKYFKSFRGE TLGFVRFQGVYLPLLWEQGFCWKSPIALAYTRGHFSALIAQEMDTDIGAGAGAPLETNEDDQVVYLPLVDYEGKLLPIPF LTASEVGREESLLQEWLDCVVTKGGCLVALQKLGKRPTMVKQMVDEWLDHYRQISHMATAPSTGLQGQNFSSDGESDQE |
|