Gene
| Gene Model ID | pfu_aug2.0_54.1_13505 |
|---|---|
| Locus | scaffold54.1 : 551397 ... 584164 : - |
| To GenomeBrowser | scaffold54.1:551397..584164 |
| Genes list of scaffold | scaffold54.1 |
| Synonym | pfu_aug1.0_77.1_50607 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| homeotic protein empty spiracles | GO:0003700 GO:0005213 GO:0005634 GO:0006355 GO:0007306 GO:0043565 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_54.1_13505.t1 | 1 | 1 | Homeobox | 101 | 157 | 1.7e-22 | 78.7 | 5.5e-26 | 2.7e-22 | 78.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_54.1_13505.t1 | gi|524909301|ref|XP_005109699.1| | PREDICTED: uncharacterized protein LOC101860203 [Aplysia californica] | 1.0e-36 |
| pfu_aug2.0_54.1_13505.t1 | gi|557759221|ref|XP_005179335.1| | PREDICTED: homeotic protein empty spiracles [Musca domestica] | 1.0e-33 |
| pfu_aug2.0_54.1_13505.t1 | gi|498953331|ref|XP_004523484.1| | 1.0e-33 | |
| pfu_aug2.0_54.1_13505.t1 | gi|195449567|ref|XP_002072128.1| | GK22678 [Drosophila willistoni] | 3.0e-33 |
| pfu_aug2.0_54.1_13505.t1 | gi|676487085|ref|XP_009064180.1| | hypothetical protein LOTGIDRAFT_58125, partial [Lottia gigantea] | 4.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_54.1_13505.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_54.1_13505.t1 atgagtctcggaagaccctgtatatccggatacgtggtagagttgtgtccacgtaatctggataactacaccatctgcta taacatagatgacgaccgtccaaagtcggcgccgaggcgtctcctcccgccgtcatcacctgtggtccccctccagcctg cttaccctgggataggagcacctgtcagagagcagtatcccgtgggtagtccatggccaatccctcgtggtgtacccggc ctgttataccctttcagtcagttagacaccagtttttacttccatccataccggaagccaaaacgtattcggacagcgtt ctctccgtcacagctcctgaaattagaacatgcgtttgagaaaaatcactacgtcgttggtcaggaaaggaaagatctag cagcaaagcttaatttaacagaaacacaggttaaagtatggttccaaaatcgcagaacaaagttcaaaagaataaaaacg gaggatggttcagaaaacgaccatgatgaagaacccggaagttcccaagatgtcgccaccagttcacaggaagtctctgt tgaccaatcagattcagatattagtgatatcgatgatcaatgctaa |
|
Protein
| Protein ID | pfu_aug2.0_54.1_13505.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_54.1_13505.t1 MSLGRPCISGYVVELCPRNLDNYTICYNIDDDRPKSAPRRLLPPSSPVVPLQPAYPGIGAPVREQYPVGSPWPIPRGVPG LLYPFSQLDTSFYFHPYRKPKRIRTAFSPSQLLKLEHAFEKNHYVVGQERKDLAAKLNLTETQVKVWFQNRRTKFKRIKT EDGSENDHDEEPGSSQDVATSSQEVSVDQSDSDISDIDDQC |
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