Gene
| Gene Model ID | pfu_aug2.0_54.1_13506 |
|---|---|
| Locus | scaffold54.1 : 591127 ... 600497 : - |
| To GenomeBrowser | scaffold54.1:591127..600497 |
| Genes list of scaffold | scaffold54.1 |
| Synonym | pfu_aug1.0_77.1_50605 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sideroflexin-5-like isoform x1 | GO:0015075 GO:0016020 GO:0034220 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_54.1_13506.t1 | 2 | 1 | Mtc | 3 | 90 | 1.19951e-42 | 145.6 | 1.8e-33 | 2.7e-29 | 101.8 |
| pfu_aug2.0_54.1_13506.t1 | 2 | 2 | Mtc | 104 | 167 | 1.19951e-42 | 145.6 | 1.7e-15 | 2.5e-11 | 42.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_54.1_13506.t1 | gi|524936733|ref|XP_005071280.1| | PREDICTED: sideroflexin-5 [Mesocricetus auratus] | 0.0 |
| pfu_aug2.0_54.1_13506.t1 | gi|583982120|ref|XP_006786357.1| | PREDICTED: sideroflexin-5-like [Neolamprologus brichardi] | 0.0 |
| pfu_aug2.0_54.1_13506.t1 | gi|573882802|ref|XP_006629576.1| | PREDICTED: sideroflexin-5-like isoform X2 [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_54.1_13506.t1 | gi|573882800|ref|XP_006629575.1| | PREDICTED: sideroflexin-5-like isoform X1 [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_54.1_13506.t1 | gi|597765037|ref|XP_007246426.1| | PREDICTED: sideroflexin-5-like [Astyanax mexicanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_54.1_13506.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_54.1_13506.t1 gcaatcattcatccggacactggacagaaggtttttatgccattcagaatgtctggttttgttccatttggttctcctat tgttgtaggactattactacccaatcagacaacagctactacaatattctggcagtggatcaatcagagccacaatgcct gtgtcaactacgccaacagaaatgccactaagcccactccacctagcagatttattgcaggttatgttggggcagtaact acagcagtttccatagcgtcccactacaaagcttcttgtccagagatttgtaccttttcctgctgttggaccaagttttt gaaaaccaatccccgcttacatctaccaatcaatgcctttctagtaacagcttgttttgggttagctctacctgttgcca ttgctctatttccacagtattctaagatttcaacggataaacttgagccagaattgcgatccttgacctcagagaaggat ctttattacaacaaagggctctga |
|
Protein
| Protein ID | pfu_aug2.0_54.1_13506.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_54.1_13506.t1 AIIHPDTGQKVFMPFRMSGFVPFGSPIVVGLLLPNQTTATTIFWQWINQSHNACVNYANRNATKPTPPSRFIAGYVGAVT TAVSIASHYKASCPEICTFSCCWTKFLKTNPRLHLPINAFLVTACFGLALPVAIALFPQYSKISTDKLEPELRSLTSEKD LYYNKGL |
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