Gene
| Gene Model ID | pfu_aug2.0_540.1_00856 |
|---|---|
| Locus | scaffold540.1 : 63054 ... 86785 : - |
| To GenomeBrowser | scaffold540.1:63054..86785 |
| Genes list of scaffold | scaffold540.1 |
| Synonym | pfu_aug1.0_3705.1_08696 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_540.1_00856.t1 | 2 | 1 | AIG1 | 206 | 409 | 0.0 | 172.3 | 0.0 | 0.0 | 172.3 |
| pfu_aug2.0_540.1_00856.t1 | 2 | 1 | MMR_HSR1 | 206 | 311 | 3.7e-07 | 30.1 | 8.2e-10 | 1.0e-06 | 28.6 |
| pfu_aug2.0_540.1_00856.t1 | 2 | 2 | MMR_HSR1 | 439 | 449 | 3.7e-07 | 30.1 | 2.5 | 3100.0 | -2.0 |
| pfu_aug2.0_540.1_00856.t1 | 2 | 2 | AIG1 | 459 | 464 | 0.0 | 172.3 | 3.3 | 4100.0 | -3.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_540.1_00856.t1 | gi|554883397|ref|XP_005951409.1| | PREDICTED: GTPase IMAP family member 7-like [Haplochromis burtoni] | 3.0e-37 |
| pfu_aug2.0_540.1_00856.t1 | gi|498926339|ref|XP_004538675.1| | 9.0e-37 | |
| pfu_aug2.0_540.1_00856.t1 | gi|499044785|ref|XP_004572987.1| | PREDICTED: GTPase IMAP family member 7-like [Maylandia zebra] | 2.0e-36 |
| pfu_aug2.0_540.1_00856.t1 | gi|554885782|ref|XP_005952500.1| | PREDICTED: GTPase IMAP family member 7-like [Haplochromis burtoni] | 6.0e-36 |
| pfu_aug2.0_540.1_00856.t1 | gi|548346590|ref|XP_005725698.1| | PREDICTED: GTPase IMAP family member 7-like [Pundamilia nyererei] | 9.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_540.1_00856.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_540.1_00856.t1 atggtcgttatgaaggatcctagcctgatcgaaataccaggaatgaaattggtaaatgtcgaatctggaagtcttctcat tcaactccatgccacgaaagaaatgtcattcaaagaagttctaagttccatcgaaaaggacatctactggaaattaaaac gcatatttcatgaggcaaaactacaagatcaatttcctgatgtcaactttgaaatgtcagtcaggggacaaggatttaca ctttggacatattcagacaaagacggaacagactatagggcagaaaagcatgctactcataaggaaaaaggtgtcaaaga gtctccacatcgagcccaaatgtcacccgtggaagttttcgatagtagtaacctttcctctatgtcacttcaaccgtcac caattacgaaagacattccattaccctcttcactgtcagggagtatgacagctgtgaaaccaaagagaaaccaaaattca tcagggtctcagtcaagcagtggtcagtatgagggatcagatttcataacagacgataatgatgtatttgatgcacctga caatggctgttctgcacaatttgctgaaagcgcaggtgctgacatatcagacgtccgcattttactgattggaaaaacag ggacgggtaagagctcaactggaaacatgattctgggaaaaaaagtttttaaaagtggagtaagtttatcatctgttacc tctaaatgtgactgtgcgtcgaccatacatacatacgacaaccaaaaatttaatgtaacaatagttgacactcccggacc ttttgactctgaaggcaaatgtgaaaacatgaacgatattttcgttgaagctgtcggcctctcgtcgccagggtttcatg ttatcataatggtattgaaaaatgacagatttacaaagcaggacgaagaaactctcgatttctacatagatttcttcgga gaaaacctctttagacatttaataatagctttcacacatcgtgatgtaatagaggcatcaatgactttcgatgaatttct gaatacactgaaacacgagaaatttagcgaaattacatcacactgtcaaaacagagtcctatgctttaacaacgtggata gttcgagagatcaacttgaccaacttttctgtcatgtgcagaatattttggaaatgaacaatggcaattgctttactgat cgcctttacaaatccgttgagggaatcatacaagatatgaggaaaagcttgagaaaatcaaagaggataaagaaggcagc tgatgtagtgaatgatcttaaacagaaataccccgatgaaacgctgaaacaaatcgagaaaagaatatctgagggacaga aagtcaaaaagatcgataaaatgttctcatcctcttctgcaaaacttatcaacgaagcactgcagtttgttgaaaaagaa gttgaaaaggaaatcaaagcagaaataattcagcatagaggcatgtggcagagaataaaagaaacaatctctaatgtttt atcaaggaagagatctaatacaaaagtgacaccagaggcttga |
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Protein
| Protein ID | pfu_aug2.0_540.1_00856.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_540.1_00856.t1 MVVMKDPSLIEIPGMKLVNVESGSLLIQLHATKEMSFKEVLSSIEKDIYWKLKRIFHEAKLQDQFPDVNFEMSVRGQGFT LWTYSDKDGTDYRAEKHATHKEKGVKESPHRAQMSPVEVFDSSNLSSMSLQPSPITKDIPLPSSLSGSMTAVKPKRNQNS SGSQSSSGQYEGSDFITDDNDVFDAPDNGCSAQFAESAGADISDVRILLIGKTGTGKSSTGNMILGKKVFKSGVSLSSVT SKCDCASTIHTYDNQKFNVTIVDTPGPFDSEGKCENMNDIFVEAVGLSSPGFHVIIMVLKNDRFTKQDEETLDFYIDFFG ENLFRHLIIAFTHRDVIEASMTFDEFLNTLKHEKFSEITSHCQNRVLCFNNVDSSRDQLDQLFCHVQNILEMNNGNCFTD RLYKSVEGIIQDMRKSLRKSKRIKKAADVVNDLKQKYPDETLKQIEKRISEGQKVKKIDKMFSSSSAKLINEALQFVEKE VEKEIKAEIIQHRGMWQRIKETISNVLSRKRSNTKVTPEA |
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