Gene
| Gene Model ID | pfu_aug2.0_540.1_00859 |
|---|---|
| Locus | scaffold540.1 : 123846 ... 132001 : + |
| To GenomeBrowser | scaffold540.1:123846..132001 |
| Genes list of scaffold | scaffold540.1 |
| Synonym | pfu_aug1.0_5798.1_38214 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cre-tyr-2 protein | GO:0003824 GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_540.1_00859.t1 | 2 | 1 | Tyrosinase | 170 | 330 | 1.8e-21 | 77.3 | 1.2e-25 | 1.8e-21 | 77.3 |
| pfu_aug2.0_540.1_00859.t1 | 2 | 2 | Tyrosinase | 453 | 474 | 1.8e-21 | 77.3 | 0.3 | 4500.0 | -2.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_540.1_00859.t1 | gi|308477535|ref|XP_003100981.1| | hypothetical protein CRE_16884 [Caenorhabditis remanei] | 2.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_540.1_00859.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_540.1_00859.t1 atggatttgatcgagttcgggaaaaaaatcgggatgttggctttgcttctactccttggtggtgtggtttgtgctgaggc ggtaattaactcctataaatttgaccaatggagtaaatgttactttggggcctatgacgtgacagaccatgctgagagta aaaggtgtgaccacatcataatgaccatgagaaagggtctgatggacatttatagaaaagatggatatgactggaaagag gactttgacatcggtctagccaaggcggaggctgactgggtgaactccttactatataaacataagcggacaaagaggca ggctacagggactgggccaagtaaagccaaaccaaggaaagaagtacgcatgatgagtctggaagaatggggcaatttta cgctggctgtaaactcgctcaaatatgaaaagataccaggttctaatagcaacaagtacgataccattgccaacatcata cgatccaatcctaactccacgatggacggaccaggatttctcggctttaacagggcgtatatagagttatttgagagggc cttacaagagttgatacccgacgtgacggtaccctactgggattctaccaaggatttctacatggacgacccaaaagaat cagtcttatggacatggatgttcttcggtgatggtaatggctttgtcagcgagggaccgttcgctaattggacagacgaa aatgggggacgattgttccgcgaagtaggcgagaatccctccagtttattcaccttacatggtctggaggcaatcttagc tcgcaaaaaccattatatgatcacattaccacaacctacagacctgaccaaacgttttaccatagagggacagcaaaatg gtgttcacgcatgggtgggtggtcagatgcgcattcgggagctgtccgcgcaggaccccgttttcttcatgcatagagcc ttcgtggattatatatggaataccttcatagaaaagtcaggggtggatcctggcagtgattatccaattaagggtggaga tgctaacaaaccagaaaatacgatgcattacttttcacagaacacaaatagggacggatacaagctggattctttgtaca tagattccccccaatgcaactccacgcacaagagctgtgggtcggtgtggttgaaatgcacgtacttttggaagcccttt aagaagcatttatgtgtctctgttacacgggcctttgctgatattaaacccagtacaccaacgctagataaagtacctaa actttcaggtacaccttataacgtagtctttgtcgacattcgcacaaaacaacttaagagaacaaaacaactgaagaaaa tctcaaaaaatcgggtttcagacgtgcaaaacctgccgccacaaaacaataccaccaaccaagctcaaaacactataaca aacgaaaagattaatgcgtcaattaattga |
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Protein
| Protein ID | pfu_aug2.0_540.1_00859.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_540.1_00859.t1 MDLIEFGKKIGMLALLLLLGGVVCAEAVINSYKFDQWSKCYFGAYDVTDHAESKRCDHIIMTMRKGLMDIYRKDGYDWKE DFDIGLAKAEADWVNSLLYKHKRTKRQATGTGPSKAKPRKEVRMMSLEEWGNFTLAVNSLKYEKIPGSNSNKYDTIANII RSNPNSTMDGPGFLGFNRAYIELFERALQELIPDVTVPYWDSTKDFYMDDPKESVLWTWMFFGDGNGFVSEGPFANWTDE NGGRLFREVGENPSSLFTLHGLEAILARKNHYMITLPQPTDLTKRFTIEGQQNGVHAWVGGQMRIRELSAQDPVFFMHRA FVDYIWNTFIEKSGVDPGSDYPIKGGDANKPENTMHYFSQNTNRDGYKLDSLYIDSPQCNSTHKSCGSVWLKCTYFWKPF KKHLCVSVTRAFADIKPSTPTLDKVPKLSGTPYNVVFVDIRTKQLKRTKQLKKISKNRVSDVQNLPPQNNTTNQAQNTIT NEKINASIN |
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