Gene
| Gene Model ID | pfu_aug2.0_540.1_00865 |
|---|---|
| Locus | scaffold540.1 : 187376 ... 219062 : + |
| To GenomeBrowser | scaffold540.1:187376..219062 |
| Genes list of scaffold | scaffold540.1 |
| Synonym | pfu_aug1.0_15554.1_46887 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_540.1_00865.t1 | 7 | 1 | VCBS | 23 | 54 | 3.6e-18 | 65.6 | 4.9e-06 | 0.036 | 14.4 |
| pfu_aug2.0_540.1_00865.t1 | 6 | 1 | FG-GAP | 37 | 58 | 4.5e-14 | 51.6 | 0.00032 | 2.4 | 7.9 |
| pfu_aug2.0_540.1_00865.t1 | 7 | 2 | VCBS | 44 | 108 | 3.6e-18 | 65.6 | 4.2e-10 | 3.1e-06 | 27.4 |
| pfu_aug2.0_540.1_00865.t1 | 6 | 2 | FG-GAP | 91 | 125 | 4.5e-14 | 51.6 | 2.9e-06 | 0.021 | 14.4 |
| pfu_aug2.0_540.1_00865.t1 | 6 | 3 | FG-GAP | 148 | 164 | 4.5e-14 | 51.6 | 0.017 | 130.0 | 2.4 |
| pfu_aug2.0_540.1_00865.t1 | 7 | 3 | VCBS | 150 | 164 | 3.6e-18 | 65.6 | 0.0054 | 40.0 | 4.6 |
| pfu_aug2.0_540.1_00865.t1 | 7 | 4 | VCBS | 155 | 218 | 3.6e-18 | 65.6 | 2.3e-05 | 0.17 | 12.2 |
| pfu_aug2.0_540.1_00865.t1 | 6 | 4 | FG-GAP | 204 | 219 | 4.5e-14 | 51.6 | 0.097 | 720.0 | 0.0 |
| pfu_aug2.0_540.1_00865.t1 | 7 | 5 | VCBS | 208 | 262 | 3.6e-18 | 65.6 | 0.011 | 85.0 | 3.6 |
| pfu_aug2.0_540.1_00865.t1 | 7 | 6 | VCBS | 306 | 337 | 3.6e-18 | 65.6 | 5.8e-07 | 0.0043 | 17.3 |
| pfu_aug2.0_540.1_00865.t1 | 6 | 5 | FG-GAP | 322 | 337 | 4.5e-14 | 51.6 | 4.2e-07 | 0.0031 | 17.1 |
| pfu_aug2.0_540.1_00865.t1 | 7 | 7 | VCBS | 391 | 406 | 3.6e-18 | 65.6 | 0.0014 | 10.0 | 6.5 |
| pfu_aug2.0_540.1_00865.t1 | 6 | 6 | FG-GAP | 399 | 407 | 4.5e-14 | 51.6 | 0.042 | 310.0 | 1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_540.1_00865.t1 | gi|676432959|ref|XP_009046744.1| | hypothetical protein LOTGIDRAFT_237922 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_540.1_00865.t1 | gi|564264855|ref|XP_006271266.1| | PREDICTED: T-cell immunomodulatory protein [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_540.1_00865.t1 | gi|557322618|ref|XP_006034397.1| | PREDICTED: T-cell immunomodulatory protein [Alligator sinensis] | 0.0 |
| pfu_aug2.0_540.1_00865.t1 | gi|543366280|ref|XP_005526499.1| | PREDICTED: T-cell immunomodulatory protein [Pseudopodoces humilis] | 0.0 |
| pfu_aug2.0_540.1_00865.t1 | gi|224064697|ref|XP_002194477.1| | PREDICTED: T-cell immunomodulatory protein [Taeniopygia guttata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_540.1_00865.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_540.1_00865.t1 atgaaactaggagctgtcacactttttttcctcggctttaactttaattttgtttcacccaggattcttaatgatgtgac agacgttacaattggtagcaatttaagaggaaaaacagttgcgttcggagattataacgcagataaaaacactgatttat ttttaatcactgaaaacaataaaaatgtggaagttttattgacatcgagagagaaaggaaccaagttcacactacatacc attctgacaatcaaagatgataacattattacaagtgttgtacctgcagatttcgatggagactcacaaattgacctact tatcatgctacagaaaactgtgtcaacatctcatgctgttcaaggacagattcattggggaatcaccagctctgttaaac ttgaaccaatggataaagcatttattttcccagaccaattcaccgaccagcctattgttatggactacaatggagacatg ataccagatttgatgggagagaaactgagtacaaaggaaaggttctactggatattcagtcaaggatccaggaactgtac agaggagaaggcagggagtaacataacagctttacatcaacctcagacgagtggattcgtggacctaaatagtgatctca cggcagatttgtgcttggtgacacatccagaaaataacaagcctcagattgaacagtggatcaacacaaatggagtattc cagattgagggtaaacctgtaccttatcctgaaggaaacatttttggtcaattagcattaattgatatgggaattacagg gcaaattatgtcagaacatgacgtcatacatcatgcgcgtgacgttacgaaggctcaaaattatgacgcgtggatcactt tgccagtggagttttatggtcagtctaagctgtggggatttgtccctcatgtccagtcgtctgatgtgggatacaaccct attacactgagagtcggagactttaatctggatggttatcctgatctactaggcgtcatcaaaaatacatctagtaaagg agtaactatacagcaagctgtattatttgagaacataccgtgctctggccctcactgtgcagggtcagagaggacattcc gtatcgactttaacacccaactacatccacagagtcagatggctattataccggcattctttgactacctagaagatgga gtgttagacattctagttaccactcagtccaaggataaaagtctccatgtccatctcctacagcaagactttacagatga cgcatgcttcctaaaagtcatggttgtgagtggactatgttttgatgattgcccctcaaacagagaaccgtatggtgtaa atcaatggggacctgttgtgaggtattccacattgaatactaacggcaaaatgcagactgctcttgcttcccagttaacc cagtctgcctattgccccatgcagctaccatttactgtgtttggtttaggacagacaccaaactttatagagaactttga agtgggcatccctcatcctctatcagaggtagaagataaacgtgagaaattacaggaagctcataaattccattttgatg ccatttgggtaaacaagttatttgtgacacctagtcgactagttctgttaacaggagcagccttactgggcacatgtggg tttatagcgggcatcgtggggatattacactggagagaaaaagtagaagataaacgtgagaaattacaggaagctcataa attccattttgatgccatgtga |
|
Protein
| Protein ID | pfu_aug2.0_540.1_00865.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_540.1_00865.t1 MKLGAVTLFFLGFNFNFVSPRILNDVTDVTIGSNLRGKTVAFGDYNADKNTDLFLITENNKNVEVLLTSREKGTKFTLHT ILTIKDDNIITSVVPADFDGDSQIDLLIMLQKTVSTSHAVQGQIHWGITSSVKLEPMDKAFIFPDQFTDQPIVMDYNGDM IPDLMGEKLSTKERFYWIFSQGSRNCTEEKAGSNITALHQPQTSGFVDLNSDLTADLCLVTHPENNKPQIEQWINTNGVF QIEGKPVPYPEGNIFGQLALIDMGITGQIMSEHDVIHHARDVTKAQNYDAWITLPVEFYGQSKLWGFVPHVQSSDVGYNP ITLRVGDFNLDGYPDLLGVIKNTSSKGVTIQQAVLFENIPCSGPHCAGSERTFRIDFNTQLHPQSQMAIIPAFFDYLEDG VLDILVTTQSKDKSLHVHLLQQDFTDDACFLKVMVVSGLCFDDCPSNREPYGVNQWGPVVRYSTLNTNGKMQTALASQLT QSAYCPMQLPFTVFGLGQTPNFIENFEVGIPHPLSEVEDKREKLQEAHKFHFDAIWVNKLFVTPSRLVLLTGAALLGTCG FIAGIVGILHWREKVEDKREKLQEAHKFHFDAM |
|