Gene
| Gene Model ID | pfu_aug2.0_5425.1_19427 |
|---|---|
| Locus | scaffold5425.1 : 20233 ... 22625 : - |
| To GenomeBrowser | scaffold5425.1:20233..22625 |
| Genes list of scaffold | scaffold5425.1 |
| Synonym | pfu_aug1.0_3958.1_66848 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5425.1_19427.t1 | 2 | 1 | rve | 63 | 82 | 1.6e-08 | 34.6 | 0.11 | 1600.0 | -0.9 |
| pfu_aug2.0_5425.1_19427.t1 | 2 | 2 | rve | 259 | 391 | 1.6e-08 | 34.6 | 5.2e-12 | 7.7e-08 | 32.4 |
Transcript
| Transcript ID | pfu_aug2.0_5425.1_19427.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5425.1_19427.t1 atgcatgttcaaacagacaaaaatccggctgatgttggcactcatggcatcagatctagagatgttcaacaaagtttgtg gttacaaccaccgatggatattctttgtgctgtaccggaaagtgaaacacacgatcctgtagatgcatcggctgatgtgg aaatacgccctgaagtaatctgtgcaaagactgacacaaaacccagtgttttcttgggagtagatcgatttagcagattc tctacttggagaagtttagtttctggcgttggatgtttagtgtcgtaccttcgtcgcaaaaagggaattactacagagaa agaaattgatgtaccagaaatagagacatttattattcgctctgtccagcaagagactttcacatctgaaattgcagcct tattgaaaggacagaatgtgtcaagagaaagtcccttagtttctttgaatccatttttggactcggaaggtctgttgcgg gttggtggcagattagggaaatcagaccttgatgaaaagaagaaacatcccgtcatcattccaaaacgttgccatgttgg agcacttttagttcttagatttcacgagaaaactttccatcaaggacgtcatattactgagggcaaaattagatctgaag gcttttggattctcggcatgaagagacaagtatcttcaatacttcatcactgtgttatctgccgtcgactgcgcagaaag agtgaaactcaaattatggctgaacttccgtcagaccgattaaaacccgctcctccttttagttatgtaggtgttgatac tttcgggcattggaacgtttttgtgagaaagagtagaggagtgagtgcgaatgccaagagatgggcaatcttatatactt gtttgtgtacaagggctattcacatagatgtagtggaggagatgtctaccgcctccttccttaatgctgttaggcgattc atcgcgcttcgcggaaaagtgatcgagtttaggtcggattgtgggaccaatttcgtgggttcgactgaaggcttgaagtc tgactgtgtcaacgtcgaagataagaccgtgaaaggctttcttttggatgagggaacaacttgggtatttaacccaccgc atgcttcccatttcggcggcgcatgggaacgcatgatcggtgttgcacgtcgcatcctaaattcacttctaattttgaca ccgatgaaaaagctgacccatgaagtgttagttacattacttgcagaagttgtcggaattgtcaactcgcgaccttttgt gccggtatctaccgatccagaaaaccctaccatactttcaccgtcagttctcctcactaataaagttggcggagatattg tgcgttttgagaattttgatgtaaaagatctttttcgcgcgcagtggttgcaagttcagacgttagctactatgttttgg aagcgttggagagcagagtacgttcagatacttcaagaacgcaagaaatggaaggctgaacgtgagaacattaagtgtgg agatgttgtgattctgaaagagaaagactgtcataggaatgattggcctttaggactggttgtgaaggcagtaagtagtg atgatggctgtgtcagaaaggtcatggtacgtgttatgaaacagggtcagccttgtgaatttttcagacccatttcggaa gtggtgttggtattatctgtttaa |
|
Protein
| Protein ID | pfu_aug2.0_5425.1_19427.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5425.1_19427.t1 MHVQTDKNPADVGTHGIRSRDVQQSLWLQPPMDILCAVPESETHDPVDASADVEIRPEVICAKTDTKPSVFLGVDRFSRF STWRSLVSGVGCLVSYLRRKKGITTEKEIDVPEIETFIIRSVQQETFTSEIAALLKGQNVSRESPLVSLNPFLDSEGLLR VGGRLGKSDLDEKKKHPVIIPKRCHVGALLVLRFHEKTFHQGRHITEGKIRSEGFWILGMKRQVSSILHHCVICRRLRRK SETQIMAELPSDRLKPAPPFSYVGVDTFGHWNVFVRKSRGVSANAKRWAILYTCLCTRAIHIDVVEEMSTASFLNAVRRF IALRGKVIEFRSDCGTNFVGSTEGLKSDCVNVEDKTVKGFLLDEGTTWVFNPPHASHFGGAWERMIGVARRILNSLLILT PMKKLTHEVLVTLLAEVVGIVNSRPFVPVSTDPENPTILSPSVLLTNKVGGDIVRFENFDVKDLFRAQWLQVQTLATMFW KRWRAEYVQILQERKKWKAERENIKCGDVVILKEKDCHRNDWPLGLVVKAVSSDDGCVRKVMVRVMKQGQPCEFFRPISE VVLVLSV |
|