Gene
| Gene Model ID | pfu_aug2.0_545.1_17538 |
|---|---|
| Locus | scaffold545.1 : 1 ... 2995 : - |
| To GenomeBrowser | scaffold545.1:1..2995 |
| Genes list of scaffold | scaffold545.1 |
| Synonym | pfu_aug1.0_973.1_36751 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calmodulin | GO:0000086 GO:0000922 GO:0001975 GO:0002027 GO:0002576 GO:0004689 GO:0005246 GO:0005509 GO:0005513 GO:0005654 GO:0005813 GO:0005829 GO:0005876 GO:0005886 GO:0005980 GO:0006006 GO:0007005 GO:0007173 GO:0007190 GO:0007202 GO:0007268 GO:0008179 GO:0008543 GO:0009405 GO:0010800 GO:0010801 GO:0010881 GO:0017022 GO:0019901 GO:0019904 GO:0021762 GO:0022400 GO:0030017 GO:0030168 GO:0030235 GO:0030426 GO:0031432 GO:0031800 GO:0031954 GO:0031996 GO:0031997 GO:0032465 GO:0032516 GO:0034704 GO:0035307 GO:0038095 GO:0043274 GO:0043388 GO:0043539 GO:0043548 GO:0043647 GO:0044325 GO:0045087 GO:0046209 GO:0048010 GO:0048011 GO:0048306 GO:0050998 GO:0051000 GO:0051343 GO:0051412 GO:0060315 GO:0060316 GO:0061024 GO:0070062 GO:0071902 GO:0072542 GO:1901339 GO:1901841 GO:1901844 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_545.1_17538.t1 | 4 | 1 | UPF0154 | 1 | 13 | 6.9e-06 | 25.5 | 1.7 | 1300.0 | -1.0 |
| pfu_aug2.0_545.1_17538.t1 | 2 | 1 | EF-hand_4 | 4 | 73 | 5.8e-08 | 32.4 | 1.5e-06 | 0.0012 | 18.5 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 1 | EF-hand_1 | 12 | 40 | 3.3e-39 | 129.2 | 1.9e-12 | 1.4e-09 | 36.4 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 1 | EF-hand_6 | 12 | 41 | 1.4e-28 | 96.1 | 1.3e-12 | 1.1e-09 | 37.3 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 1 | EF-hand_8 | 13 | 38 | 7.2e-31 | 105.5 | 7.0e-05 | 0.054 | 13.1 |
| pfu_aug2.0_545.1_17538.t1 | 2 | 1 | EF-hand_7 | 14 | 73 | 7.4e-36 | 122.1 | 1.2e-18 | 9.6e-16 | 57.6 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 1 | EF-hand_5 | 14 | 37 | 8.7e-26 | 88.0 | 9.6e-10 | 7.5e-07 | 28.2 |
| pfu_aug2.0_545.1_17538.t1 | 2 | 1 | EF-hand_9 | 16 | 75 | 4.0e-12 | 45.8 | 6.2e-11 | 4.9e-08 | 32.7 |
| pfu_aug2.0_545.1_17538.t1 | 2 | 1 | SPARC_Ca_bdg | 16 | 70 | 8.5e-07 | 28.9 | 2.4e-05 | 0.018 | 15.0 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 2 | EF-hand_8 | 25 | 75 | 7.2e-31 | 105.5 | 1.1e-15 | 8.9e-13 | 47.6 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 2 | UPF0154 | 28 | 56 | 6.9e-06 | 25.5 | 0.00086 | 0.67 | 9.6 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 2 | EF-hand_1 | 48 | 75 | 3.3e-39 | 129.2 | 3.5e-12 | 2.8e-09 | 35.6 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 2 | EF-hand_6 | 49 | 74 | 1.4e-28 | 96.1 | 6.6e-06 | 0.0051 | 16.5 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 2 | EF-hand_5 | 49 | 73 | 8.7e-26 | 88.0 | 2.9e-07 | 0.00023 | 20.3 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 3 | UPF0154 | 70 | 91 | 6.9e-06 | 25.5 | 1.6 | 1300.0 | -0.9 |
| pfu_aug2.0_545.1_17538.t1 | 2 | 2 | SPARC_Ca_bdg | 81 | 138 | 8.5e-07 | 28.9 | 0.00014 | 0.11 | 12.5 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 3 | EF-hand_8 | 82 | 105 | 7.2e-31 | 105.5 | 4.2e-07 | 0.00033 | 20.2 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 3 | EF-hand_1 | 85 | 113 | 3.3e-39 | 129.2 | 3.6e-13 | 2.8e-10 | 38.7 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 3 | EF-hand_6 | 85 | 114 | 1.4e-28 | 96.1 | 1.1e-12 | 8.6e-10 | 37.6 |
| pfu_aug2.0_545.1_17538.t1 | 2 | 2 | EF-hand_7 | 86 | 140 | 7.4e-36 | 122.1 | 8.7e-21 | 6.8e-18 | 64.5 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 3 | EF-hand_5 | 86 | 110 | 8.7e-26 | 88.0 | 6.9e-10 | 5.4e-07 | 28.6 |
| pfu_aug2.0_545.1_17538.t1 | 2 | 2 | EF-hand_9 | 89 | 138 | 4.0e-12 | 45.8 | 0.00027 | 0.21 | 11.5 |
| pfu_aug2.0_545.1_17538.t1 | 2 | 2 | EF-hand_4 | 95 | 140 | 5.8e-08 | 32.4 | 0.00014 | 0.11 | 12.2 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 4 | EF-hand_8 | 98 | 140 | 7.2e-31 | 105.5 | 1.5e-15 | 1.1e-12 | 47.2 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 4 | UPF0154 | 101 | 129 | 6.9e-06 | 25.5 | 0.00021 | 0.16 | 11.5 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 4 | EF-hand_1 | 121 | 140 | 3.3e-39 | 129.2 | 1.2e-07 | 9.7e-05 | 21.4 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 4 | EF-hand_5 | 125 | 139 | 8.7e-26 | 88.0 | 0.00049 | 0.38 | 10.1 |
| pfu_aug2.0_545.1_17538.t1 | 4 | 4 | EF-hand_6 | 127 | 139 | 1.4e-28 | 96.1 | 0.1 | 78.0 | 3.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_545.1_17538.t1 | gi|115728591|ref|XP_780862.2| | 0.0 | |
| pfu_aug2.0_545.1_17538.t1 | gi|698455748|ref|XP_009702107.1| | PREDICTED: calmodulin-like [Cariama cristata] | 0.0 |
| pfu_aug2.0_545.1_17538.t1 | gi|511958025|ref|XP_004797282.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_545.1_17538.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_545.1_17538.t1 atggctgaacaactgtcggaagaacaaatcgcagaattcaaagaagcattcagtttgttcgataaggatggagatgggac gattactaccaaagagcttgggactgtgatgagatcattgggacagaatccaacagaggcagaattacaggacatgatca atgaagtggatgttgatggaaatggcacgatagatttcccagaatttttgacgatgatggctagatcgatgaaggaatct gactcagacgaagaacttcgtgaagccttcagagtgttcgacaaagacggaaacggatacattagtgctgctgaactacg tcacgtgatgacgaatctcggagaaaaactcacagatgaagaagtggacgagatgatacgagaagctgatattgatggcg acggtcaagttaattatgaag |
|
Protein
| Protein ID | pfu_aug2.0_545.1_17538.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_545.1_17538.t1 MAEQLSEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDVDGNGTIDFPEFLTMMARSMKES DSDEELREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE |
|