Gene
| Gene Model ID | pfu_aug2.0_545.1_17539 |
|---|---|
| Locus | scaffold545.1 : 6025 ... 9815 : - |
| To GenomeBrowser | scaffold545.1:6025..9815 |
| Genes list of scaffold | scaffold545.1 |
| Synonym | pfu_aug1.0_973.1_36751 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calmodulin isoform x1 | GO:0000922 GO:0002027 GO:0005509 GO:0005513 GO:0005634 GO:0005813 GO:0005876 GO:0010880 GO:0019901 GO:0019904 GO:0021762 GO:0030017 GO:0030801 GO:0031432 GO:0031996 GO:0031997 GO:0032465 GO:0032516 GO:0034704 GO:0035307 GO:0043274 GO:0044325 GO:0051343 GO:0055117 GO:0060316 GO:0070062 GO:0072542 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_545.1_17539.t1 | 2 | 1 | EF-hand_4 | 4 | 69 | 1.7e-10 | 40.5 | 4.7e-05 | 0.029 | 14.0 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 1 | EF-hand_1 | 8 | 36 | 3.40516e-43 | 141.6 | 2.5e-12 | 1.5e-09 | 36.4 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 1 | EF-hand_6 | 8 | 37 | 8.2e-32 | 106.2 | 1.8e-12 | 1.1e-09 | 37.3 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 1 | EF-hand_8 | 9 | 34 | 4.9e-33 | 112.5 | 0.00011 | 0.068 | 12.7 |
| pfu_aug2.0_545.1_17539.t1 | 2 | 1 | EF-hand_7 | 10 | 69 | 4.7e-38 | 129.1 | 3.8e-18 | 2.4e-15 | 56.4 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 1 | EF-hand_5 | 10 | 33 | 7.7e-28 | 94.5 | 1.3e-09 | 7.9e-07 | 28.1 |
| pfu_aug2.0_545.1_17539.t1 | 2 | 1 | EF-hand_9 | 12 | 71 | 7.9e-16 | 57.7 | 4.2e-11 | 2.6e-08 | 33.6 |
| pfu_aug2.0_545.1_17539.t1 | 2 | 1 | SPARC_Ca_bdg | 12 | 66 | 3.5e-09 | 36.6 | 4.2e-05 | 0.026 | 14.5 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 2 | EF-hand_8 | 21 | 71 | 4.9e-33 | 112.5 | 1.1e-15 | 6.7e-13 | 48.0 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 2 | EF-hand_1 | 44 | 71 | 3.40516e-43 | 141.6 | 5.3e-12 | 3.3e-09 | 35.3 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 2 | EF-hand_6 | 45 | 70 | 8.2e-32 | 106.2 | 1.0e-05 | 0.0063 | 16.3 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 2 | EF-hand_5 | 45 | 69 | 7.7e-28 | 94.5 | 2.8e-07 | 0.00017 | 20.7 |
| pfu_aug2.0_545.1_17539.t1 | 2 | 2 | SPARC_Ca_bdg | 70 | 140 | 3.5e-09 | 36.6 | 5.0e-07 | 0.00031 | 20.7 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 3 | EF-hand_8 | 79 | 101 | 4.9e-33 | 112.5 | 5.4e-05 | 0.033 | 13.7 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 3 | EF-hand_1 | 81 | 109 | 3.40516e-43 | 141.6 | 9.0e-13 | 5.6e-10 | 37.7 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 3 | EF-hand_6 | 81 | 110 | 8.2e-32 | 106.2 | 6.5e-12 | 4.0e-09 | 35.5 |
| pfu_aug2.0_545.1_17539.t1 | 2 | 2 | EF-hand_4 | 81 | 143 | 1.7e-10 | 40.5 | 1.8e-08 | 1.1e-05 | 25.1 |
| pfu_aug2.0_545.1_17539.t1 | 2 | 2 | EF-hand_7 | 82 | 142 | 4.7e-38 | 129.1 | 1.4e-23 | 8.8e-21 | 73.8 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 3 | EF-hand_5 | 82 | 106 | 7.7e-28 | 94.5 | 3.1e-10 | 1.9e-07 | 30.0 |
| pfu_aug2.0_545.1_17539.t1 | 2 | 2 | EF-hand_9 | 85 | 143 | 7.9e-16 | 57.7 | 1.2e-07 | 7.5e-05 | 22.5 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 4 | EF-hand_8 | 94 | 142 | 4.9e-33 | 112.5 | 1.0e-19 | 6.4e-17 | 60.9 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 4 | EF-hand_1 | 117 | 143 | 3.40516e-43 | 141.6 | 1.8e-12 | 1.1e-09 | 36.8 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 4 | EF-hand_5 | 121 | 142 | 7.7e-28 | 94.5 | 2.3e-06 | 0.0015 | 17.8 |
| pfu_aug2.0_545.1_17539.t1 | 4 | 4 | EF-hand_6 | 123 | 143 | 8.2e-32 | 106.2 | 1.6e-05 | 0.0099 | 15.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_545.1_17539.t1 | gi|594088147|ref|XP_006067530.1| | PREDICTED: calmodulin isoform X1 [Bubalus bubalis] | 0.0 |
| pfu_aug2.0_545.1_17539.t1 | gi|734632081|ref|XP_010744456.1| | PREDICTED: calmodulin-A-like, partial [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_545.1_17539.t1 | gi|705703565|ref|XP_010126793.1| | PREDICTED: calmodulin, partial [Chlamydotis macqueenii] | 0.0 |
| pfu_aug2.0_545.1_17539.t1 | gi|260796529|ref|XP_002593257.1| | hypothetical protein BRAFLDRAFT_59748 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_545.1_17539.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_545.1_17539.t1 atgaatgaagaacaaattgcagaattcaaggaagcattcagtttgtttgataaggatggagatgggacgattactaccaa agagcttgggactgtgatgagatcattgggacagaacccaacagaggcagaattacaggacatgatcaatgaagtggatg ctgatggtaatggcacaattgattttcccgagtttcttacaatgatggcaaagaagacaaaagaaacagactgtgaagag gagcttaaagaggccttcagagtgtttgataaagacggaaatggtcagataagtgctgctgagctacgtcacgtgatgac gaacctcggagaaaaactcacagacgaggaggtggacgagatgataaaagaggcggacattgatggcgatggtcaagtta attatgaagaatttgtgaaaatgatgagacctacataa |
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Protein
| Protein ID | pfu_aug2.0_545.1_17539.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_545.1_17539.t1 MNEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAKKTKETDCEE ELKEAFRVFDKDGNGQISAAELRHVMTNLGEKLTDEEVDEMIKEADIDGDGQVNYEEFVKMMRPT |
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