Gene
| Gene Model ID | pfu_aug2.0_545.1_17540 |
|---|---|
| Locus | scaffold545.1 : 14239 ... 16875 : - |
| To GenomeBrowser | scaffold545.1:14239..16875 |
| Genes list of scaffold | scaffold545.1 |
| Synonym | pfu_aug1.0_973.1_36751 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_545.1_17540.t1 | 4 | 1 | EF-hand_8 | 13 | 39 | 7.3e-19 | 67.1 | 1.0e-07 | 0.00014 | 21.3 |
| pfu_aug2.0_545.1_17540.t1 | 4 | 1 | EF-hand_1 | 14 | 41 | 1.2e-22 | 77.4 | 3.7e-11 | 5.0e-08 | 31.6 |
| pfu_aug2.0_545.1_17540.t1 | 4 | 1 | EF-hand_6 | 14 | 42 | 1.6e-19 | 67.9 | 1.9e-11 | 2.5e-08 | 33.1 |
| pfu_aug2.0_545.1_17540.t1 | 3 | 1 | EF-hand_5 | 15 | 37 | 1.4e-13 | 49.5 | 9.1e-10 | 1.2e-06 | 27.5 |
| pfu_aug2.0_545.1_17540.t1 | 2 | 1 | EF-hand_9 | 17 | 74 | 1.8e-08 | 34.1 | 8.9e-05 | 0.12 | 12.3 |
| pfu_aug2.0_545.1_17540.t1 | 2 | 1 | EF-hand_7 | 18 | 71 | 3.4e-22 | 78.3 | 5.7e-10 | 7.7e-07 | 29.1 |
| pfu_aug2.0_545.1_17540.t1 | 4 | 2 | EF-hand_8 | 27 | 74 | 7.3e-19 | 67.1 | 5.6e-07 | 0.00076 | 19.0 |
| pfu_aug2.0_545.1_17540.t1 | 4 | 2 | EF-hand_6 | 52 | 74 | 1.6e-19 | 67.9 | 0.17 | 230.0 | 2.0 |
| pfu_aug2.0_545.1_17540.t1 | 4 | 3 | EF-hand_8 | 62 | 109 | 7.3e-19 | 67.1 | 5.0e-05 | 0.068 | 12.8 |
| pfu_aug2.0_545.1_17540.t1 | 4 | 2 | EF-hand_1 | 63 | 74 | 1.2e-22 | 77.4 | 0.33 | 440.0 | 0.5 |
| pfu_aug2.0_545.1_17540.t1 | 4 | 3 | EF-hand_1 | 84 | 112 | 1.2e-22 | 77.4 | 2.0e-07 | 0.00027 | 20.0 |
| pfu_aug2.0_545.1_17540.t1 | 4 | 3 | EF-hand_6 | 84 | 111 | 1.6e-19 | 67.9 | 8.4e-08 | 0.00011 | 21.7 |
| pfu_aug2.0_545.1_17540.t1 | 3 | 2 | EF-hand_5 | 85 | 100 | 1.4e-13 | 49.5 | 0.00016 | 0.21 | 10.9 |
| pfu_aug2.0_545.1_17540.t1 | 2 | 2 | EF-hand_7 | 86 | 145 | 3.4e-22 | 78.3 | 8.7e-17 | 1.2e-13 | 51.0 |
| pfu_aug2.0_545.1_17540.t1 | 2 | 2 | EF-hand_9 | 87 | 146 | 1.8e-08 | 34.1 | 3.5e-07 | 0.00047 | 20.0 |
| pfu_aug2.0_545.1_17540.t1 | 4 | 4 | EF-hand_8 | 109 | 145 | 7.3e-19 | 67.1 | 6.2e-13 | 8.4e-10 | 38.1 |
| pfu_aug2.0_545.1_17540.t1 | 4 | 4 | EF-hand_1 | 120 | 147 | 1.2e-22 | 77.4 | 1.5e-10 | 2.0e-07 | 29.7 |
| pfu_aug2.0_545.1_17540.t1 | 3 | 3 | EF-hand_5 | 125 | 145 | 1.4e-13 | 49.5 | 0.00029 | 0.39 | 10.1 |
| pfu_aug2.0_545.1_17540.t1 | 4 | 4 | EF-hand_6 | 126 | 146 | 1.6e-19 | 67.9 | 4.8e-05 | 0.065 | 13.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_545.1_17540.t1 | gi|303273540|ref|XP_003056131.1| | calmodulin [Micromonas pusilla CCMP1545] | 4.00001e-41 |
| pfu_aug2.0_545.1_17540.t1 | gi|255070097|ref|XP_002507130.1| | calmodulin [Micromonas sp. RCC299] | 7.00005e-41 |
| pfu_aug2.0_545.1_17540.t1 | gi|66815357|ref|XP_641695.1| | hypothetical protein DDB_G0279407 [Dictyostelium discoideum AX4] | 6.0e-40 |
| pfu_aug2.0_545.1_17540.t1 | gi|695034373|ref|XP_009404694.1| | PREDICTED: calmodulin-like [Musa acuminata subsp. malaccensis] | 1.0e-39 |
| pfu_aug2.0_545.1_17540.t1 | gi|695041775|ref|XP_009408507.1| | PREDICTED: calmodulin-like protein 11 [Musa acuminata subsp. malaccensis] | 2.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_545.1_17540.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_545.1_17540.t1 atgttccaggatgagacgtttaccgacgagcagatagaagagttccaggcagtgtttgacgcttttgacaaagatggcga cgggtctgtcaccctggatgaactcaagatggcgatgaatcaactaggacaaacatcggaaatagaagatgttctcaaag agtctgattttcaaaattttgaagaaataaagttcaaggacttcctgaattttctgcgcaaaaagttacgagagccggaa gtagaagaagaaatgaaagcagcattccgaatattcgaccgaagcgggtcaggttttattagatctagtgacgtcaagac tgtgatgtcacatatgggggaaaggttaaccaatcaggaagctgatgagatgatacgattagcagatttaaaagggaacg gatatgtaacatacgatgaatttgttcagcttatgatgacggtcaagacgctttaa |
|
Protein
| Protein ID | pfu_aug2.0_545.1_17540.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_545.1_17540.t1 MFQDETFTDEQIEEFQAVFDAFDKDGDGSVTLDELKMAMNQLGQTSEIEDVLKESDFQNFEEIKFKDFLNFLRKKLREPE VEEEMKAAFRIFDRSGSGFIRSSDVKTVMSHMGERLTNQEADEMIRLADLKGNGYVTYDEFVQLMMTVKTL |
|