Gene
| Gene Model ID | pfu_aug2.0_545.1_17541 |
|---|---|
| Locus | scaffold545.1 : 17625 ... 22465 : - |
| To GenomeBrowser | scaffold545.1:17625..22465 |
| Genes list of scaffold | scaffold545.1 |
| Synonym | pfu_aug1.0_973.1_36751 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| partial | GO:0005509 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_545.1_17541.t1 | 2 | 1 | SPARC_Ca_bdg | 9 | 73 | 1.9e-07 | 31.1 | 5.2e-06 | 0.0045 | 17.0 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 1 | EF-hand_8 | 13 | 40 | 4.6e-35 | 118.9 | 4.4e-05 | 0.038 | 13.5 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 1 | EF-hand_1 | 15 | 43 | 5.0e-40 | 131.7 | 3.3e-11 | 2.9e-08 | 32.4 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 1 | EF-hand_6 | 15 | 44 | 1.4e-29 | 99.3 | 2.2e-11 | 1.9e-08 | 33.4 |
| pfu_aug2.0_545.1_17541.t1 | 2 | 1 | EF-hand_4 | 15 | 76 | 1.6e-08 | 34.1 | 4.4e-06 | 0.0039 | 16.9 |
| pfu_aug2.0_545.1_17541.t1 | 2 | 1 | EF-hand_7 | 17 | 76 | 3.5e-32 | 110.3 | 9.8e-18 | 8.6e-15 | 54.6 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 1 | EF-hand_5 | 17 | 40 | 7.8e-27 | 91.3 | 1.8e-08 | 1.6e-05 | 24.0 |
| pfu_aug2.0_545.1_17541.t1 | 2 | 1 | EF-hand_9 | 19 | 77 | 8.2e-13 | 48.0 | 1.1e-09 | 1.0e-06 | 28.5 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 2 | EF-hand_8 | 28 | 78 | 4.6e-35 | 118.9 | 6.3e-17 | 5.5e-14 | 51.5 |
| pfu_aug2.0_545.1_17541.t1 | 3 | 1 | UPF0154 | 32 | 60 | 2.7e-06 | 26.9 | 0.00041 | 0.36 | 10.4 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 2 | EF-hand_1 | 51 | 78 | 5.0e-40 | 131.7 | 8.0e-13 | 6.9e-10 | 37.5 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 2 | EF-hand_5 | 55 | 76 | 7.8e-27 | 91.3 | 6.6e-08 | 5.7e-05 | 22.2 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 2 | EF-hand_6 | 57 | 77 | 1.4e-29 | 99.3 | 4.1e-07 | 0.00036 | 20.1 |
| pfu_aug2.0_545.1_17541.t1 | 3 | 2 | UPF0154 | 70 | 94 | 2.7e-06 | 26.9 | 0.39 | 340.0 | 0.9 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 3 | EF-hand_8 | 85 | 113 | 4.6e-35 | 118.9 | 3.5e-07 | 0.0003 | 20.3 |
| pfu_aug2.0_545.1_17541.t1 | 2 | 2 | SPARC_Ca_bdg | 85 | 146 | 1.9e-07 | 31.1 | 0.00013 | 0.11 | 12.5 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 3 | EF-hand_1 | 88 | 115 | 5.0e-40 | 131.7 | 2.8e-10 | 2.5e-07 | 29.5 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 3 | EF-hand_6 | 88 | 114 | 1.4e-29 | 99.3 | 2.5e-10 | 2.2e-07 | 30.1 |
| pfu_aug2.0_545.1_17541.t1 | 2 | 2 | EF-hand_7 | 89 | 148 | 3.5e-32 | 110.3 | 2.8e-18 | 2.5e-15 | 56.3 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 3 | EF-hand_5 | 89 | 111 | 7.8e-27 | 91.3 | 3.4e-08 | 3.0e-05 | 23.1 |
| pfu_aug2.0_545.1_17541.t1 | 2 | 2 | EF-hand_9 | 92 | 149 | 8.2e-13 | 48.0 | 2.8e-06 | 0.0024 | 17.7 |
| pfu_aug2.0_545.1_17541.t1 | 2 | 2 | EF-hand_4 | 101 | 146 | 1.6e-08 | 34.1 | 1.4e-05 | 0.013 | 15.2 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 4 | EF-hand_8 | 102 | 151 | 4.6e-35 | 118.9 | 4.1e-17 | 3.5e-14 | 52.1 |
| pfu_aug2.0_545.1_17541.t1 | 3 | 3 | UPF0154 | 104 | 132 | 2.7e-06 | 26.9 | 0.00015 | 0.13 | 11.8 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 4 | EF-hand_1 | 124 | 151 | 5.0e-40 | 131.7 | 1.9e-12 | 1.7e-09 | 36.3 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 4 | EF-hand_6 | 126 | 150 | 1.4e-29 | 99.3 | 2.1e-05 | 0.018 | 14.8 |
| pfu_aug2.0_545.1_17541.t1 | 4 | 4 | EF-hand_5 | 126 | 149 | 7.8e-27 | 91.3 | 4.0e-08 | 3.5e-05 | 22.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_545.1_17541.t1 | gi|558173241|ref|XP_006125554.1| | PREDICTED: calmodulin-like isoform X1 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_545.1_17541.t1 | gi|488510631|ref|XP_004447401.1| | PREDICTED: calmodulin [Dasypus novemcinctus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_545.1_17541.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_545.1_17541.t1 atggcagaatccttccataatctgagtgaagaacaagaagcagaatttcgagaagcctttagtttatttgacaaggacgg tgatgggttgataacaactagagagctgagtacagtcatgaggtccctaggacaaaacccaagtgcacatgaactggcag agatgatcagggaagtggatgcagatggaaatggcacgatagattttgaggagttcctggcgatgatgataaagacgatg aaggggtccgactcagaggaggagctcagacaagcgttcagactatttgacagaaacaagagcggatatatcacagctcc ggaacttaaattcgtcatgtgtaaaatgggggagaggctgacggacgaggagatagaggaaatgataagagaagcagacc tggacggggatgggaaaattaattataacgaatttgtacgaatggtgacggattgtcagaaagattga |
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Protein
| Protein ID | pfu_aug2.0_545.1_17541.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_545.1_17541.t1 MAESFHNLSEEQEAEFREAFSLFDKDGDGLITTRELSTVMRSLGQNPSAHELAEMIREVDADGNGTIDFEEFLAMMIKTM KGSDSEEELRQAFRLFDRNKSGYITAPELKFVMCKMGERLTDEEIEEMIREADLDGDGKINYNEFVRMVTDCQKD |
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