Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_545.1_17546
Locus scaffold545.1 : 93806 ... 96260 : +
To GenomeBrowser scaffold545.1:93806..96260
Genes list of scaffold scaffold545.1
Synonym pfu_aug1.0_5527.1_16681

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_545.1_17546.t1 1 1 7tm_1 10 231 2.0e-07 30.4 9.5e-11 2.8e-07 29.9

Transcript
Transcript IDpfu_aug2.0_545.1_17546.t1
Definition-
>pfu_aug2.0_545.1_17546.t1
atgaaatacgtgatcatttcaacaactntacctccagcttttatatatggatctgtgcctttccaaaacccacacggaaa
tatcaccggatatagatgcagcattgtgaaatctggatacaaaagacttgcatacgcatacggaatatccttggcagtgc
ttgcagtcgtcatcgtgacgtcattagttataatgtattctaggataggcttcgccgttcgatctcatctgaaaagaatt
tctaaatttcgctcattgacttcattaaatagctctgttcaatctctacatcacgtaaatggaaataagcgtgttgcgaa
ggacacagatcagctgcatgtggaagaaaacaaccaaaagttggaactgaaatcaaaggaaacggaaatgacgcaatcta
ataagaggacgacagaaagtgcaatggaatcttctcaaaatctagtcaaaccacatgcccatgtaaatgtgccacaggac
gcggaagaccgagaacttatgttgaaatttacaatcatgtttgtactgattaccgttgttttctttgtgtgctttgctac
taaaggtacaatcatggtcatagaggcactggacccgtacttctgggaaaacatagacagtgttacgagagcaataatga
tactaatgtataatctgtatatattcagctatgttatcaatccaattattttcgcagcatttgatggtcagtttaaatat
gaactcaaacgtttacgtagtcgactatgtagaaaatag

Protein
Protein IDpfu_aug2.0_545.1_17546.t1
Definition-
>pfu_aug2.0_545.1_17546.t1
MKYVIISTTXPPAFIYGSVPFQNPHGNITGYRCSIVKSGYKRLAYAYGISLAVLAVVIVTSLVIMYSRIGFAVRSHLKRI
SKFRSLTSLNSSVQSLHHVNGNKRVAKDTDQLHVEENNQKLELKSKETEMTQSNKRTTESAMESSQNLVKPHAHVNVPQD
AEDRELMLKFTIMFVLITVVFFVCFATKGTIMVIEALDPYFWENIDSVTRAIMILMYNLYIFSYVINPIIFAAFDGQFKY
ELKRLRSRLCRK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495