Gene
| Gene Model ID | pfu_aug2.0_545.1_17547 |
|---|---|
| Locus | scaffold545.1 : 101326 ... 107665 : - |
| To GenomeBrowser | scaffold545.1:101326..107665 |
| Genes list of scaffold | scaffold545.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calmodulin-like protein 3 | GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_545.1_17547.t1 | 3 | 1 | EF-hand_4 | 11 | 38 | 1.4e-07 | 31.1 | 0.0017 | 2.2 | 8.0 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 1 | EF-hand_1 | 12 | 40 | 7.5e-29 | 96.8 | 9.8e-11 | 1.3e-07 | 30.3 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 1 | EF-hand_6 | 12 | 41 | 3.7e-26 | 88.6 | 1.3e-10 | 1.7e-07 | 30.5 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 1 | EF-hand_8 | 12 | 32 | 3.4e-23 | 80.9 | 0.0018 | 2.4 | 7.8 |
| pfu_aug2.0_545.1_17547.t1 | 2 | 1 | EF-hand_7 | 13 | 73 | 1.0e-29 | 102.4 | 8.0e-14 | 1.1e-10 | 41.5 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 1 | EF-hand_5 | 13 | 33 | 4.8e-19 | 66.7 | 8.0e-10 | 1.1e-06 | 27.7 |
| pfu_aug2.0_545.1_17547.t1 | 2 | 1 | SPARC_Ca_bdg | 13 | 71 | 1.0e-05 | 25.4 | 0.00011 | 0.14 | 12.1 |
| pfu_aug2.0_545.1_17547.t1 | 2 | 1 | EF-hand_9 | 14 | 76 | 1.4e-10 | 40.8 | 6.3e-08 | 8.5e-05 | 22.3 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 2 | EF-hand_8 | 25 | 74 | 3.4e-23 | 80.9 | 7.1e-11 | 9.6e-08 | 31.5 |
| pfu_aug2.0_545.1_17547.t1 | 3 | 2 | EF-hand_4 | 46 | 73 | 1.4e-07 | 31.1 | 0.0017 | 2.4 | 7.9 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 2 | EF-hand_1 | 57 | 75 | 7.5e-29 | 96.8 | 3.7e-07 | 0.0005 | 19.1 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 2 | EF-hand_6 | 57 | 75 | 3.7e-26 | 88.6 | 2.3e-06 | 0.0032 | 17.2 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 2 | EF-hand_5 | 57 | 72 | 4.8e-19 | 66.7 | 0.00084 | 1.1 | 8.6 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 3 | EF-hand_8 | 83 | 102 | 3.4e-23 | 80.9 | 0.00033 | 0.45 | 10.1 |
| pfu_aug2.0_545.1_17547.t1 | 2 | 2 | SPARC_Ca_bdg | 84 | 143 | 1.0e-05 | 25.4 | 0.00016 | 0.21 | 11.6 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 3 | EF-hand_1 | 85 | 113 | 7.5e-29 | 96.8 | 1.6e-09 | 2.2e-06 | 26.5 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 3 | EF-hand_6 | 85 | 114 | 3.7e-26 | 88.6 | 3.8e-09 | 5.1e-06 | 25.9 |
| pfu_aug2.0_545.1_17547.t1 | 2 | 2 | EF-hand_7 | 86 | 144 | 1.0e-29 | 102.4 | 3.3e-20 | 4.4e-17 | 61.9 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 3 | EF-hand_5 | 87 | 102 | 4.8e-19 | 66.7 | 2.6e-06 | 0.0035 | 16.6 |
| pfu_aug2.0_545.1_17547.t1 | 2 | 2 | EF-hand_9 | 89 | 146 | 1.4e-10 | 40.8 | 3.4e-06 | 0.0046 | 16.8 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 4 | EF-hand_8 | 98 | 148 | 3.4e-23 | 80.9 | 4.4e-16 | 5.9e-13 | 48.2 |
| pfu_aug2.0_545.1_17547.t1 | 3 | 3 | EF-hand_4 | 99 | 143 | 1.4e-07 | 31.1 | 2.7e-05 | 0.036 | 13.7 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 4 | EF-hand_1 | 121 | 146 | 7.5e-29 | 96.8 | 2.6e-10 | 3.5e-07 | 29.0 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 4 | EF-hand_5 | 124 | 145 | 4.8e-19 | 66.7 | 3.8e-08 | 5.1e-05 | 22.4 |
| pfu_aug2.0_545.1_17547.t1 | 4 | 4 | EF-hand_6 | 129 | 146 | 3.7e-26 | 88.6 | 1.3e-05 | 0.018 | 14.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_545.1_17547.t1 | gi|674057110|ref|XP_008835072.1| | PREDICTED: calmodulin-like protein 3 [Nannospalax galili] | 0.0 |
| pfu_aug2.0_545.1_17547.t1 | gi|512894205|ref|XP_004897704.1| | 0.0 | |
| pfu_aug2.0_545.1_17547.t1 | gi|533138243|ref|XP_005383897.1| | PREDICTED: calmodulin-like protein 3 isoform X1 [Chinchilla lanigera] | 0.0 |
| pfu_aug2.0_545.1_17547.t1 | gi|589955283|ref|XP_006990261.1| | PREDICTED: calmodulin-like protein 3 [Peromyscus maniculatus bairdii] | 0.0 |
| pfu_aug2.0_545.1_17547.t1 | gi|562860274|ref|XP_006158525.1| | PREDICTED: calmodulin-like protein 3 [Tupaia chinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_545.1_17547.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_545.1_17547.t1 atggctgacgtattcagtgacgaagacttggccgagctgaaaacgacgtttgatctgtttgacaaaaacaacgatggttt tattgatagaactgaactcgggatcgccatgaagtcaatgggactccacccaacggaagcggaactaagtatgctagtca gtattccggatggtgatgggaatgggttaatcgactttaacgaattcataaaaataatgtcaaaaagatcaggagagttg gaaccggaagacgaacttcggaatgccttcaagattatcgataaagacggaactggtacgataagtggatctgcattgcg tcagataatgacaacccttggtgaaaaactgtctgacgaagaagtagaggagatgataagggacgctgacacagacggtg atggcatgatcaatatggaagaattcatcgaggtgttattaagaaaatag |
|
Protein
| Protein ID | pfu_aug2.0_545.1_17547.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_545.1_17547.t1 MADVFSDEDLAELKTTFDLFDKNNDGFIDRTELGIAMKSMGLHPTEAELSMLVSIPDGDGNGLIDFNEFIKIMSKRSGEL EPEDELRNAFKIIDKDGTGTISGSALRQIMTTLGEKLSDEEVEEMIRDADTDGDGMINMEEFIEVLLRK |
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