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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_545.1_17550
Locus scaffold545.1 : 130116 ... 142533 : +
To GenomeBrowser scaffold545.1:130116..142533
Genes list of scaffold scaffold545.1
Synonym pfu_aug1.0_1388.1_22567

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_545.1_17550.t1 2 1 EF-hand_8 14 43 4.9e-12 45.2 1.0e-08 1.2e-05 24.8
pfu_aug2.0_545.1_17550.t1 2 1 EF-hand_1 17 44 7.8e-17 59.2 1.1e-11 1.3e-08 33.5
pfu_aug2.0_545.1_17550.t1 2 1 EF-hand_6 17 44 1.1e-13 49.8 6.6e-11 7.6e-08 31.6
pfu_aug2.0_545.1_17550.t1 1 1 EF-hand_7 18 77 1.2e-16 60.6 1.2e-19 1.4e-16 60.4
pfu_aug2.0_545.1_17550.t1 2 1 EF-hand_5 19 41 7.3e-13 47.2 4.8e-10 5.5e-07 28.6
pfu_aug2.0_545.1_17550.t1 2 2 EF-hand_1 53 79 7.8e-17 59.2 3.2e-09 3.7e-06 25.8
pfu_aug2.0_545.1_17550.t1 2 2 EF-hand_8 53 79 4.9e-12 45.2 1.7e-07 0.00019 20.9
pfu_aug2.0_545.1_17550.t1 2 2 EF-hand_6 56 79 1.1e-13 49.8 1.6e-06 0.0018 17.9
pfu_aug2.0_545.1_17550.t1 2 2 EF-hand_5 58 77 7.3e-13 47.2 2.1e-06 0.0024 17.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_545.1_17550.t1 gi|684379082|ref|XP_009166212.1| hypothetical protein T265_13247, partial [Opisthorchis viverrini] 2.0e-11
pfu_aug2.0_545.1_17550.t1 gi|575510077|ref|XP_006684309.1| hypothetical protein CANTEDRAFT_118328 [Candida tenuis ATCC 10573] 5.0e-11
pfu_aug2.0_545.1_17550.t1 gi|156376815|ref|XP_001630554.1| predicted protein [Nematostella vectensis] 7.0e-11
pfu_aug2.0_545.1_17550.t1 gi|146413479|ref|XP_001482710.1| calmodulin [Meyerozyma guilliermondii ATCC 6260] 9.0e-11

Transcript
Transcript IDpfu_aug2.0_545.1_17550.t1
Definition-
>pfu_aug2.0_545.1_17550.t1
atggttgtcgtcacagtcaagcgtagggaatacaaagattcagatgccgaagtgaagaagatcttcaaaaagtttgatac
cgatcatgatggtgtcttgtccagaagtgaacttgttaatgtgttaaaaacgatcggagataaactgttggtagcagacg
ttgaagaaatattgactgattttgacgagaaccacgacggtgtgatccaatatgaggagttcgcaaagatgttgaatctc
cgatag

Protein
Protein IDpfu_aug2.0_545.1_17550.t1
Definition-
>pfu_aug2.0_545.1_17550.t1
MVVVTVKRREYKDSDAEVKKIFKKFDTDHDGVLSRSELVNVLKTIGDKLLVADVEEILTDFDENHDGVIQYEEFAKMLNL
R

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