Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_545.1_17551
Locus scaffold545.1 : 169113 ... 189346 : -
To GenomeBrowser scaffold545.1:169113..189346
Genes list of scaffold scaffold545.1
Synonym NA

Manual annotation
Annotation by Blast2GO
Annotation GO
protein o-mannosyl-transferase 2 GO:0000030 GO:0006493 GO:0016020 GO:0097502

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_545.1_17551.t1 2 1 PMT 15 104 3.4e-20 72.4 6.8e-24 3.4e-20 72.4
pfu_aug2.0_545.1_17551.t1 1 1 MIR 152 314 3.4e-22 78.8 9.5e-26 4.7e-22 78.4
pfu_aug2.0_545.1_17551.t1 2 2 PMT 396 455 3.4e-20 72.4 0.44 2200.0 -2.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_545.1_17551.t1 gi|676483661|ref|XP_009063096.1| hypothetical protein LOTGIDRAFT_129702 [Lottia gigantea] 0.0
pfu_aug2.0_545.1_17551.t1 gi|524869269|ref|XP_005091430.1| PREDICTED: protein O-mannosyl-transferase 2-like [Aplysia californica] 0.0
pfu_aug2.0_545.1_17551.t1 gi|91086799|ref|XP_973439.1| PREDICTED: protein O-mannosyl-transferase 2 [Tribolium castaneum] 0.0
pfu_aug2.0_545.1_17551.t1 gi|345495435|ref|XP_001600041.2| PREDICTED: protein O-mannosyl-transferase 2 [Nasonia vitripennis] 0.0
pfu_aug2.0_545.1_17551.t1 gi|665813438|ref|XP_008555274.1| PREDICTED: protein O-mannosyl-transferase 2 [Microplitis demolitor] 0.0

Transcript
Transcript IDpfu_aug2.0_545.1_17551.t1
Definition-
>pfu_aug2.0_545.1_17551.t1
atggaaataaattactctttagcaatacatccattcatcctttcaaaatttccattttccgttggctggtggttttggct
tgccatgactggtgtatttatttctgcttccattggagtaaaatttgttgggttatttatcattctactgataggattta
caactgtctcagatttatggaatctcctaggaaaccattttcttgccatgactgatgttataaagcactttgtagccaga
gcagtgtgtctcatattgattcctatagtagtgtacatgattatatttgctgtgcatttcaaagttttaaaccatagtgg
taatggggatgggttttacagttctgcattccagtcacaactcataggaaataaattatataatgtcagtatgccagaaa
acatagcatttggtagtataataacattgaagcagagaagaacgggcggagcctatttacactcccactggcacctctac
cctgaggatcacccacccagacaacagcagattactacatatgcacataaggattataacaattactggaaaatcaagat
ggctgacagggaagcagaggagaacgaaaccgcccagcttattgttagtggtgaccttgtacggcttgaacatgttgtaa
caagaagaaatctacacagtcacgcagaacaagctccattatccaagaaacactaccaggtgtctggttacggtactaac
ggtacaggagacgccaatgatgtgtggattgtagaggtggtgggatatcctctaggtacgcctatacaaacagctagatc
caaactcaagtttatacactaccatgtcagatgtgctctgtattcccatgataagaaactacctaaatggggctgggagc
agatggaggcaacatgtaacccaaacctgagagaacctaaggctgtatggagtgtagaagaaatctcagatgaaagatta
cccaatgctagttttgagctgtattcaccaagctttgctgagaagatcatggaaagccatgcagttatgactcagggaaa
tagtggtctgaaaccaaaagaaggtgaaataacatcccgaccttggcagtggcccatcaacttcaggggtcagattttct
ctggaaaagaccacagaatttatctcctgggaaatccaatcatattttggggatgtttggttgctatggcaatatttctt
ctactgtatcttatccactctgtgaaagttaaaaggaaaatcaaagaaaatgagttatggagagcgtacaaagagaaggt
ctttggagcgtgttggtggttatttttaggatgggccctgcattacctccccttttggcctatgacccgtgttttatact
ttcaccattattttccagcttttctctacagtgcaatgcttacaggtataacaatagacttctctgtaactgccgtgggg
aggatcctaccagagagttggaccatggttgtgttccacactatcattggctctgttctagggatattagcactcagctt
ttatttattctatccactgacatatggtatgtcaggtcccatggcccagcaggagggtagtatgatgtatggcttaaaat
ggatggactcatgggatatatga

Protein
Protein IDpfu_aug2.0_545.1_17551.t1
Definition-
>pfu_aug2.0_545.1_17551.t1
MEINYSLAIHPFILSKFPFSVGWWFWLAMTGVFISASIGVKFVGLFIILLIGFTTVSDLWNLLGNHFLAMTDVIKHFVAR
AVCLILIPIVVYMIIFAVHFKVLNHSGNGDGFYSSAFQSQLIGNKLYNVSMPENIAFGSIITLKQRRTGGAYLHSHWHLY
PEDHPPRQQQITTYAHKDYNNYWKIKMADREAEENETAQLIVSGDLVRLEHVVTRRNLHSHAEQAPLSKKHYQVSGYGTN
GTGDANDVWIVEVVGYPLGTPIQTARSKLKFIHYHVRCALYSHDKKLPKWGWEQMEATCNPNLREPKAVWSVEEISDERL
PNASFELYSPSFAEKIMESHAVMTQGNSGLKPKEGEITSRPWQWPINFRGQIFSGKDHRIYLLGNPIIFWGCLVAMAIFL
LLYLIHSVKVKRKIKENELWRAYKEKVFGACWWLFLGWALHYLPFWPMTRVLYFHHYFPAFLYSAMLTGITIDFSVTAVG
RILPESWTMVVFHTIIGSVLGILALSFYLFYPLTYGMSGPMAQQEGSMMYGLKWMDSWDI

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495