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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_5456.1_22677
Locus scaffold5456.1 : 2316 ... 21076 : +
To GenomeBrowser scaffold5456.1:2316..21076
Genes list of scaffold scaffold5456.1
Synonym pfu_aug1.0_13066.1_61147

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_5456.1_22677.t1 1 1 p450 43 458 0.0 242.1 0.0 0.0 241.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_5456.1_22677.t1 gi|524868173|ref|XP_005090891.1| PREDICTED: cytochrome P450 20A1-like [Aplysia californica] 0.0
pfu_aug2.0_5456.1_22677.t1 gi|676492242|ref|XP_009065855.1| hypothetical protein LOTGIDRAFT_133362 [Lottia gigantea] 0.0

Transcript
Transcript IDpfu_aug2.0_5456.1_22677.t1
Definition-
>pfu_aug2.0_5456.1_22677.t1
atgcttgacttcgttatatttgctgttacatttttcgtggttttacttgcagctgtgatatatttatatccaggttcaag
caagccaagcagtatacctggaccagatcctagtacagaacaagatggaaatcttccggacatatccagagcaggaagtc
ttcatgaatatctacttgacctacataaaacctacggagatatagcgtctttctggatgggtcgacagtttgttgtcagc
atctgttcaccggagctcttcaaggaacatcagaacgtgtttgacagaccaccggaattgttcaaactgtttgaaccatt
cattggtccaaagtccatacagtacgcaaataaaggtgatggcagaaagcgaagaaataattacgacaaaatgcttgctc
atgaaaaattgaaggagtattaccatatttttcaaaatgttgcagacgatcttgagaagaaatggggacagcttgttaaa
gaagagcacatccctcttggacagtatatgagtgcctatgccatcaaagtcgttcttaacactttattcggggaatattt
tacaacagacaaagaaattcttacatttagaaggaattatgacatatgctggagtgaaatggagagaagactgacagatc
aacctgatcctgatagcccaagagtaaaggcgtttgaagatgccaaaaaaatagttacatcattgataaaaaaggccatt
gaacacagaaaaaaagttccaccgaattcagattctgagctatttatagactcactaatagacaacgctagtgatgaaga
agagttactgagtgatgctataagttatgctgtgggaggttttcacaccacaggaaatgttctgacgtgggggttctact
ttttggcgacacatgaagattttcaagagaaagctgtgaaagaaataaaacaggtgctgggaaatgagaatgtggatgca
tccaacatgagtaaacttaagtatcttcatcaaattctggatgagacgatgaggtgtgcagtggttgctccaatggccgc
aaggtttcaagattttgattctgagcttggtgggcataaaatacccaaaaatactccagttattcatgccctcggtgtta
gcctgcagaatgaaaaatatttcccactgccaaataaatttgatccagacagatttaacactgaaaacagcaaagccaga
ccatctatggctttccaacctttcggatttgccggaaaaagggtgtgtccaggatatagatttgcatatgctgaagctat
tgtttgccttgtgacattacttaggaagttcaaggtcaaaatggttgaaggtcaagttgtaacaccagtccatggactcg
tcacacatccggaagaggagatctgggtcaaaatccaaaaaaggtga

Protein
Protein IDpfu_aug2.0_5456.1_22677.t1
Definition-
>pfu_aug2.0_5456.1_22677.t1
MLDFVIFAVTFFVVLLAAVIYLYPGSSKPSSIPGPDPSTEQDGNLPDISRAGSLHEYLLDLHKTYGDIASFWMGRQFVVS
ICSPELFKEHQNVFDRPPELFKLFEPFIGPKSIQYANKGDGRKRRNNYDKMLAHEKLKEYYHIFQNVADDLEKKWGQLVK
EEHIPLGQYMSAYAIKVVLNTLFGEYFTTDKEILTFRRNYDICWSEMERRLTDQPDPDSPRVKAFEDAKKIVTSLIKKAI
EHRKKVPPNSDSELFIDSLIDNASDEEELLSDAISYAVGGFHTTGNVLTWGFYFLATHEDFQEKAVKEIKQVLGNENVDA
SNMSKLKYLHQILDETMRCAVVAPMAARFQDFDSELGGHKIPKNTPVIHALGVSLQNEKYFPLPNKFDPDRFNTENSKAR
PSMAFQPFGFAGKRVCPGYRFAYAEAIVCLVTLLRKFKVKMVEGQVVTPVHGLVTHPEEEIWVKIQKR

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