Gene
| Gene Model ID | pfu_aug2.0_5456.1_22678 |
|---|---|
| Locus | scaffold5456.1 : 22634 ... 27836 : - |
| To GenomeBrowser | scaffold5456.1:22634..27836 |
| Genes list of scaffold | scaffold5456.1 |
| Synonym | pfu_aug1.0_8608.1_67901 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5456.1_22678.t1 | 2 | 1 | zf-CDGSH | 44 | 76 | 3.0e-29 | 100.5 | 1.1e-19 | 1.6e-15 | 56.6 |
| pfu_aug2.0_5456.1_22678.t1 | 2 | 2 | zf-CDGSH | 92 | 123 | 3.0e-29 | 100.5 | 2.9e-17 | 4.3e-13 | 48.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5456.1_22678.t1 | gi|751216479|ref|XP_011161189.1| | PREDICTED: CDGSH iron-sulfur domain-containing protein 3, mitochondrial [Solenopsis invicta] | 2.0e-33 |
| pfu_aug2.0_5456.1_22678.t1 | gi|91085373|ref|XP_971748.1| | PREDICTED: CDGSH iron-sulfur domain-containing protein 3, mitochondrial [Tribolium castaneum] | 3.0e-33 |
| pfu_aug2.0_5456.1_22678.t1 | gi|755951177|ref|XP_011301674.1| | PREDICTED: CDGSH iron-sulfur domain-containing protein 3, mitochondrial [Fopius arisanus] | 1.0e-32 |
| pfu_aug2.0_5456.1_22678.t1 | gi|752877065|ref|XP_011255957.1| | PREDICTED: CDGSH iron-sulfur domain-containing protein 3, mitochondrial isoform X1 [Camponotus floridanus] | 2.0e-32 |
| pfu_aug2.0_5456.1_22678.t1 | gi|752877067|ref|XP_011255958.1| | PREDICTED: CDGSH iron-sulfur domain-containing protein 3, mitochondrial isoform X2 [Camponotus floridanus] | 2.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_5456.1_22678.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5456.1_22678.t1 gtttcaaaatgctcaatgtgtgattatgaagatgtgaaagatcttctcaggcagaaaaagagaaaacatccagaaacccc aaaaactaacatagaccccacggaaattataaaaggcaaaatgtgggacaaaaaacctttcaaggtggaattaaaagctg ataaacgctattcctggtgtgcttgtggttacagtaaaaatcagccattctgtgatggaagtcatagggctcttagctat cagttggcagtaggtaataagaagatacatatcaagcctcaccgattcaaagttgaagaaacaaaggagtattggctatg taactgtaaacaaacagataacagaccattctgtgatggatcacataagaaacctgaggtggcagccatcacaagagggc cagggcccaatttttag |
|
Protein
| Protein ID | pfu_aug2.0_5456.1_22678.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5456.1_22678.t1 VSKCSMCDYEDVKDLLRQKKRKHPETPKTNIDPTEIIKGKMWDKKPFKVELKADKRYSWCACGYSKNQPFCDGSHRALSY QLAVGNKKIHIKPHRFKVEETKEYWLCNCKQTDNRPFCDGSHKKPEVAAITRGPGPNF |
|