Gene
| Gene Model ID | pfu_aug2.0_547.1_24160 |
|---|---|
| Locus | scaffold547.1 : 1063 ... 5829 : + |
| To GenomeBrowser | scaffold547.1:1063..5829 |
| Genes list of scaffold | scaffold547.1 |
| Synonym | pfu_aug1.0_595.1_65533 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_547.1_24160.t1 | 2 | 1 | TBP | 2 | 85 | 2.1e-18 | 65.4 | 1.6e-16 | 7.9e-13 | 47.5 |
| pfu_aug2.0_547.1_24160.t1 | 2 | 2 | TBP | 91 | 141 | 2.1e-18 | 65.4 | 1.9e-06 | 0.0094 | 15.2 |
| pfu_aug2.0_547.1_24160.t1 | 2 | 1 | rve | 198 | 301 | 1.8e-19 | 70.0 | 2.4e-22 | 1.2e-18 | 67.3 |
| pfu_aug2.0_547.1_24160.t1 | 2 | 2 | rve | 319 | 353 | 1.8e-19 | 70.0 | 0.24 | 1200.0 | -0.5 |
Transcript
| Transcript ID | pfu_aug2.0_547.1_24160.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_547.1_24160.t1 atggttcgtattagtaatatcgtctgttcggtcaatttagattgccgaatcgatctgagaaaactagccatgacggtaac aaatattcgatatcatgccgatcggcataatgtggccatttggcaaaataggcgaattgggggtaattgtctggtgtacg ctcaaggaaaactagtgtgtaacggttatgtggaatctattgaaactgctaaaaggaggttgagactttatgcacgtaaa cttcaaaagctggggtacccagcctgtttcaaagagtttagaatcttgaccatctccatggttcacgacctgggtattcc catctcgttaccggacttgtgtcatgcacgttacgagcccgaaatctttccgggagccgtattggctaaagaaaacgtgc gcttcacttgctttcattccggagccagtaaactttgggctcagtcccaggctgatggtaaaaacataagcaagtatcgt atacaaaaatggctacaaagccaagataattataccctcactcgtcaagtgaggcggacttttcctcgaaatcgtgtcgt ggtggagggtttagatagtcagtgggaggcagacttgatggatctgacgtcagtggccaaagacaacaagggttataaat acgtcttaatcaccatagacgtgttttcgagatacgtctgcggaagaccgctcaaagacaaaacctctaaatcagtggtg ggggctatgaatgacatcctggctatgggcagacaaccttctctgttacgtaccgacaaaggatccgaattcaaaaacaa agagttctctcttttctgtaaaagaaaaggtatcaaacacttttggacacagaacgaaacgaaatgcgcatatgccgagc gagtgatcaagacccttaaaatgaaaatttacagaatgatgacgaatcggcataatgagtacgttgaccaactgccggac atcatcaacagctacaatcacacattccatcggtctttgggtacgcaacccatcctagttactaaagacaacgaaagcga aatacgcttacagcaatatcttcgacgaccgaaaagtaaaagacgaatcaaaaagaaggcctatgttttgaagctgggtg atcttgtccgcatatcccatctcaaaacctcttcctttgacgggcagtatcaattgtgtattgcatctgagggaaatatg accacgcacgtttacgattacaatagaaaggcctgggttccatacgaacccgacattgaccggtataaagactattttgt ggccatgagtgaggggagggtcaaacccgggaaatacattgttacaccgcagactgaatacaggcctgtcaatcaaatag cggacgattcacccttagaattcaacattcctgcagcctctatcaacaatgtcgatctaaaatgcaccaggctccatatc aagcttcaactccagaagaaggacggtactcctgtgaataaagatgaccccgttgcacttaccaattttcccatcgcttc tctattttctcaaatcaacataaacctccagcatcagcctctcagccaacttggtacgaattctccatacaaagcctact ttgatgtccttctgaatagcactcaagccgatcaggatggacaatttaccagtatgggttatgtccaagacagtgcaggg agcatggatgaccaagatcccataaaggtatcattgtatgtgaggcagacgtacactagagaaggtcagacggtggtctt tgaaggacccttgtatttagacgtgtgccaacaagatagactgctcatgaacggggttcctatcacaatcaaactctggc ctcattctaacaaatttaaactgatggccatgaccgatgattacaaggtcaacttgaaagatgcctattttttgtaa |
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Protein
| Protein ID | pfu_aug2.0_547.1_24160.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_547.1_24160.t1 MVRISNIVCSVNLDCRIDLRKLAMTVTNIRYHADRHNVAIWQNRRIGGNCLVYAQGKLVCNGYVESIETAKRRLRLYARK LQKLGYPACFKEFRILTISMVHDLGIPISLPDLCHARYEPEIFPGAVLAKENVRFTCFHSGASKLWAQSQADGKNISKYR IQKWLQSQDNYTLTRQVRRTFPRNRVVVEGLDSQWEADLMDLTSVAKDNKGYKYVLITIDVFSRYVCGRPLKDKTSKSVV GAMNDILAMGRQPSLLRTDKGSEFKNKEFSLFCKRKGIKHFWTQNETKCAYAERVIKTLKMKIYRMMTNRHNEYVDQLPD IINSYNHTFHRSLGTQPILVTKDNESEIRLQQYLRRPKSKRRIKKKAYVLKLGDLVRISHLKTSSFDGQYQLCIASEGNM TTHVYDYNRKAWVPYEPDIDRYKDYFVAMSEGRVKPGKYIVTPQTEYRPVNQIADDSPLEFNIPAASINNVDLKCTRLHI KLQLQKKDGTPVNKDDPVALTNFPIASLFSQININLQHQPLSQLGTNSPYKAYFDVLLNSTQADQDGQFTSMGYVQDSAG SMDDQDPIKVSLYVRQTYTREGQTVVFEGPLYLDVCQQDRLLMNGVPITIKLWPHSNKFKLMAMTDDYKVNLKDAYFL |
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