Gene
| Gene Model ID | pfu_aug2.0_547.1_24165 |
|---|---|
| Locus | scaffold547.1 : 90289 ... 95725 : - |
| To GenomeBrowser | scaffold547.1:90289..95725 |
| Genes list of scaffold | scaffold547.1 |
| Synonym | pfu_aug1.0_2034.1_15684 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_547.1_24165.t1 | 1 | 1 | LRAT | 14 | 140 | 1.8e-30 | 105.4 | 4.5e-34 | 2.2e-30 | 105.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_547.1_24165.t1 | gi|524888572|ref|XP_005100855.1| | PREDICTED: HRAS-like suppressor 3-like isoform X1 [Aplysia californica] | 4.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_547.1_24165.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_547.1_24165.t1 atggatccatatacagcggcgttacatcataaccaaaccaccttacagaaactacgagtaggagacatggtggaattcaa aagaggattatattcacattggggagtatatattggtaatgaagaaatagttcacttaactggagatgaaaacgatggaa tcaatggaaatgtgaactctggtcatttgttcactatatgtggcaagaactttaataaggcatatgtgaaaaaagacaaa ttctgggatgttgtattggattctaaagcttacaagaacaacgataaagataagaaattgaaccccctttctgccacaga gatcgtggagttagctttgagtaaaattggagagataggatacaacgtactgtggagtaattgtgaacattttgcagccc tttgtcgttatggtcaaatgaagtcagatcaggcggagggtttcttaaaaggagtgatgacggcagctgccggtgttatg ataacggcagtgggatgggcgtggttaaaaggagatgacaaaaaaggaaagggaggtggagttaagaaataa |
|
Protein
| Protein ID | pfu_aug2.0_547.1_24165.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_547.1_24165.t1 MDPYTAALHHNQTTLQKLRVGDMVEFKRGLYSHWGVYIGNEEIVHLTGDENDGINGNVNSGHLFTICGKNFNKAYVKKDK FWDVVLDSKAYKNNDKDKKLNPLSATEIVELALSKIGEIGYNVLWSNCEHFAALCRYGQMKSDQAEGFLKGVMTAAAGVM ITAVGWAWLKGDDKKGKGGGVKK |
|