Gene
| Gene Model ID | pfu_aug2.0_547.1_24166 |
|---|---|
| Locus | scaffold547.1 : 101186 ... 106632 : + |
| To GenomeBrowser | scaffold547.1:101186..106632 |
| Genes list of scaffold | scaffold547.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_547.1_24166.t1 | 2 | 1 | Lectin_C | 70 | 70 | 3.0e-10 | 40.6 | 3.0 | 15000.0 | -4.7 |
| pfu_aug2.0_547.1_24166.t1 | 2 | 2 | Lectin_C | 117 | 189 | 3.0e-10 | 40.6 | 6.1e-14 | 3.0e-10 | 40.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_547.1_24166.t1 | gi|617468269|ref|XP_007574478.1| | PREDICTED: galactose-specific lectin nattectin-like [Poecilia formosa] | 8.0e-14 |
| pfu_aug2.0_547.1_24166.t1 | gi|617468341|ref|XP_007574503.1| | PREDICTED: galactose-specific lectin nattectin-like [Poecilia formosa] | 5.0e-13 |
| pfu_aug2.0_547.1_24166.t1 | gi|658860752|ref|XP_008413134.1| | PREDICTED: galactose-specific lectin nattectin-like isoform X1 [Poecilia reticulata] | 1.0e-12 |
| pfu_aug2.0_547.1_24166.t1 | gi|658860754|ref|XP_008413135.1| | PREDICTED: galactose-specific lectin nattectin-like isoform X2 [Poecilia reticulata] | 1.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_547.1_24166.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_547.1_24166.t1 atgagtgaaggtgtcttaacaaacgattcactccgatatagccacttctacaggactctagcaacggataaccttctggc cgtggacagtaacactgtgtttcctgtagacaattttagccagtgtctcctggcttgcaacgctgatgacacctgtacgt catttttctccaacgcgatgacgtctgaatgcatgttatctgatgtctgttatcgtagaaacatgtcgacaatgccgatg tcaactgagatgggttggaattactttcaaagcttctgtaattgttcaagttgttgcgatgacggatggacccaatatga aaactcgtgtttccgcgtcgatgcgtcgaggagaagttgggcggactcgaaggcatattgcgagggactaaatgcctcac ttgcagagcctcgtacacagcgattaaacagttttctgactctgcagaaaaagaaagtgagtaacgtggaggcttggata ggagcagaagatagcgtaacggagggtatgtggagatggagtacaatgggagacgaatttgaatacacaaactggctttt tgcacatccagataactacgggtaa |
|
Protein
| Protein ID | pfu_aug2.0_547.1_24166.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_547.1_24166.t1 MSEGVLTNDSLRYSHFYRTLATDNLLAVDSNTVFPVDNFSQCLLACNADDTCTSFFSNAMTSECMLSDVCYRRNMSTMPM STEMGWNYFQSFCNCSSCCDDGWTQYENSCFRVDASRRSWADSKAYCEGLNASLAEPRTQRLNSFLTLQKKKVSNVEAWI GAEDSVTEGMWRWSTMGDEFEYTNWLFAHPDNYG |
|