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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_547.1_24169
Locus scaffold547.1 : 154455 ... 158065 : -
To GenomeBrowser scaffold547.1:154455..158065
Genes list of scaffold scaffold547.1
Synonym pfu_aug1.0_165345.1_71942

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_547.1_24169.t1 2 1 p450 60 303 0.0 187.8 0.0 8.60397e-43 146.5
pfu_aug2.0_547.1_24169.t1 2 2 p450 311 365 0.0 187.8 2.3e-14 1.7e-10 40.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_547.1_24169.t1 gi|507715295|ref|XP_004648669.1| PREDICTED: cytochrome P450 2B4-like [Octodon degus] 0.0
pfu_aug2.0_547.1_24169.t1 gi|354505855|ref|XP_003514983.1| PREDICTED: cytochrome P450 2B1-like isoform X1 [Cricetulus griseus] 0.0
pfu_aug2.0_547.1_24169.t1 gi|548439433|ref|XP_005745110.1| PREDICTED: cytochrome P450 2B4-like [Pundamilia nyererei] 0.0
pfu_aug2.0_547.1_24169.t1 gi|675617055|ref|XP_008937369.1| PREDICTED: cytochrome P450 2H1-like isoform X1 [Merops nubicus] 0.0

Transcript
Transcript IDpfu_aug2.0_547.1_24169.t1
Definition-
>pfu_aug2.0_547.1_24169.t1
atgtacaacatcagagggaagctaaaagcttcaagtgttggttggatagcattatacataatgacgacgacgatgataat
gaaccctttcacagaagtatggaccgttctagcaggcgttgcggtgacgtttctttccatcctagcgttacagcgttaca
gatctcgacgtaaactcccaccaggacccagaggagttcctttcctcggtaatgcaacacagataagatttgatgatttg
atcaacgaattcaagagactacgggcgaaatatggcgatattttcagtttcaaagtctttggtcagccggtcatcgttgc
caatggttacgagtctatacgacagttattgatcactgaggcggattccatttctgacagaccaggaaaactcgcggagg
acaatcctcatcagttaggtattgctgcaagttccgggccattatggaaggaacacagatccttcggactgaaaacattg
agagagttcggattcggaaaacaaagcgtggagatacaaatccaagaagaggtgatagacttccttaatgacataaacga
tacaaacggaaaacctttcaacatccacgactttctggcagctagcatctccaatatcatatgctctatggcctttggta
agagattcgaacactctgatcgtaggctgctgaaactgctggactttataaacgacaatttgtccgattccaacagaatt
gctgatatttttgtgccgttccttgattggttaccaggggacccgcttaatagaaaatcccgattggccagaattactga
agttaaagctttcctgaaagaaattatagaagagcataaaaacacgctggacgagaatcataaaagagactacattgaca
cgtttttgattcaacaaaacaacggtagagaaacagaaaacagtacattcacaggaaggagggcgtgtctcggggaatct
ctagctaaatcagaactattcttatttctgacgtcattgattcagaggtttgaactacttccggaggatgaggaagtatt
gccatcaaccgagggaattctgggagcaacgtacagtcctaaaccgttcaaaattcgggcaatttcccgcgtttga

Protein
Protein IDpfu_aug2.0_547.1_24169.t1
Definition-
>pfu_aug2.0_547.1_24169.t1
MYNIRGKLKASSVGWIALYIMTTTMIMNPFTEVWTVLAGVAVTFLSILALQRYRSRRKLPPGPRGVPFLGNATQIRFDDL
INEFKRLRAKYGDIFSFKVFGQPVIVANGYESIRQLLITEADSISDRPGKLAEDNPHQLGIAASSGPLWKEHRSFGLKTL
REFGFGKQSVEIQIQEEVIDFLNDINDTNGKPFNIHDFLAASISNIICSMAFGKRFEHSDRRLLKLLDFINDNLSDSNRI
ADIFVPFLDWLPGDPLNRKSRLARITEVKAFLKEIIEEHKNTLDENHKRDYIDTFLIQQNNGRETENSTFTGRRACLGES
LAKSELFLFLTSLIQRFELLPEDEEVLPSTEGILGATYSPKPFKIRAISRV

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