Gene
| Gene Model ID | pfu_aug2.0_5477.1_26072 |
|---|---|
| Locus | scaffold5477.1 : 12926 ... 20924 : + |
| To GenomeBrowser | scaffold5477.1:12926..20924 |
| Genes list of scaffold | scaffold5477.1 |
| Synonym | pfu_aug1.0_2055.1_15691 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5477.1_26072.t1 | 3 | 1 | CN_hydrolase | 6 | 43 | 4.3e-14 | 52.3 | 1.1e-05 | 0.17 | 11.2 |
| pfu_aug2.0_5477.1_26072.t1 | 3 | 2 | CN_hydrolase | 56 | 139 | 4.3e-14 | 52.3 | 4.0e-14 | 5.9e-10 | 38.8 |
| pfu_aug2.0_5477.1_26072.t1 | 3 | 3 | CN_hydrolase | 164 | 184 | 4.3e-14 | 52.3 | 0.32 | 4700.0 | -3.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5477.1_26072.t1 | gi|742220096|ref|XP_010898978.1| | PREDICTED: omega-amidase NIT2 [Esox lucius] | 0.0 |
| pfu_aug2.0_5477.1_26072.t1 | gi|597770704|ref|XP_007249145.1| | PREDICTED: omega-amidase NIT2-like [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_5477.1_26072.t1 | gi|196004684|ref|XP_002112209.1| | hypothetical protein TRIADDRAFT_56014 [Trichoplax adhaerens] | 0.0 |
| pfu_aug2.0_5477.1_26072.t1 | gi|213513542|ref|NP_001135127.1| | omega-amidase NIT2 [Salmo salar] | 0.0 |
| pfu_aug2.0_5477.1_26072.t1 | gi|348530240|ref|XP_003452619.1| | PREDICTED: omega-amidase NIT2-like [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5477.1_26072.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5477.1_26072.t1 atggcaaatcgtatccgactggcgctgatacagttattggccaaacagtcacgtgaccagaatctacagagagcggagga gtacatcaataaagccgtccaacatggcacggatatggttgtactaccagtaagggaaaaaaatcgctccatacctgaag ccataaaaggagatagaatatttaacacgtgtaatgtatttgatcctaatggtaaaattatagcgcagcacagaaagatg cacatgtttgatgtacagcttggtccacacctgaacatcagcgaatcagaattatcagattccggaaataaacttactac ctttcacacaggaaagtgcaaggttggaatcggaatctgcattgatatcaggtatcctgaaatatgcaggttatatacgg agagaggatgcaaactgcagctatttttgggagcattcagcgctctgaaaacaggtccggctcattgggaggtggtacaa cgagctcgtgcaatagacaatcaggtgttcatagcaacatgtgcccccgccagggatgatacggcacactacgcctcttg gggccatagcatggtggtcgacccatggggcaaaataatatcgtctgctggggaagaggaatgcatcgtccatgcggaat tagacttggattacataggagatgttagaacgaaacttccattagaaaacatcagacgaaaggatttatatacaataaag tatatgggagattga |
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Protein
| Protein ID | pfu_aug2.0_5477.1_26072.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5477.1_26072.t1 MANRIRLALIQLLAKQSRDQNLQRAEEYINKAVQHGTDMVVLPVREKNRSIPEAIKGDRIFNTCNVFDPNGKIIAQHRKM HMFDVQLGPHLNISESELSDSGNKLTTFHTGKCKVGIGICIDIRYPEICRLYTERGCKLQLFLGAFSALKTGPAHWEVVQ RARAIDNQVFIATCAPARDDTAHYASWGHSMVVDPWGKIISSAGEEECIVHAELDLDYIGDVRTKLPLENIRRKDLYTIK YMGD |
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