Gene
| Gene Model ID | pfu_aug2.0_548.1_27524 |
|---|---|
| Locus | scaffold548.1 : 134006 ... 136151 : + |
| To GenomeBrowser | scaffold548.1:134006..136151 |
| Genes list of scaffold | scaffold548.1 |
| Synonym | pfu_aug1.0_1280.1_22519 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_548.1_27524.t1 | 2 | 1 | zf-B_box | 16 | 52 | 1.7e-13 | 50.2 | 2.1e-09 | 5.3e-06 | 26.2 |
| pfu_aug2.0_548.1_27524.t1 | 2 | 2 | zf-B_box | 75 | 112 | 1.7e-13 | 50.2 | 2.5e-10 | 6.3e-07 | 29.1 |
Transcript
| Transcript ID | pfu_aug2.0_548.1_27524.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_548.1_27524.t1 atgagtgacaatgaggccgcatcaatacctccccagacatttgtagaatgtggccgatgtggagggaacgccaacatatc atggttttgtaagaactgtcctacttcactttgtgacgactgcgctaccgcccacaaaacaaaccaccaatacaagtccc acgcagttgtaccacggacatataccgtccttcgattatacggaccggcaaaattagcagaacaatgccacatccatttg gaaaaagaaatactatcctactgcaatgagtgcgacatgccgtgctgcatatcatgtctggctaacaatcataatggcca taacttctctacaatagaagacaaatacctggatgctgagaaaggcttgaatgaatactacagacatttggacaccgaca tcagaccaacgcttgaaaaaatggaggaacaagccagagccgatgtcagagaagacgacatgaatgttgagaaagtcatt gatgaaattaatgattttcgtacaaacgttgttcaaaatttcaatagagcttgtgatgatctcattgttcaggttaaaaa gatatcctgtgaaaacaccaaaagcttgagagaaattgaaagcttaatgcagaaccttgaatctattaaaaacgaaatta cagcaaaaatagctgaggggaatttagatatcataaaatatcgacccccagatttcgagactcttttccctaaattagat aaagccaaaacagtggtaccagtctttaaaccctctagcaaagtgttatgtgttatcaaggaatcagtgggaataattga tttcaaaaagataagtcgaagggatagaaacaaaacaaatatcactgtaaatgttgaaaaaattaatacatttaacagta aaataggcgcaacatctatgaacacagctggtaacaacatggcctggatcgcgtttctttttagtcccaccatatatctg tataatgataagggtgaggtagtcaggcctgtgacgatgaaaggttgtacgggcatcaatggcatttccatcacacagtc tggggacatgatagtcacatgtaacgacaagaaagtgaggcgtgtatcagtgagtggtgaggtgtctacaatgatagata cggatccctttgactgtaaaggtgtgtgtctgactgacaaggaggagattgtagtatgtttgataggaaatgctgaaatg aatcacgtggttgtattctcacctgatgggcgtagtcagctacgtgagatgcggaaaaaggacggtcgggggaaccaact tattgttacgccagtctgtgtggcacgaaatggtcaggatctgtgtgtggtaaatggacgaaataatgtagtttgtatag ataagagagataatgtgagatggatatatgacggtaatcaagctaaattaggggaatcttttagtccacgttgcatatgt gtagataagtaccacaacacgctggtttctgatggaaacaaccactgtgtacattatatagatagggaaggagggctgat aaaagtaatactcacaaaggaagaaacagaatttacaagccattgggggatttgtgtagataatttcactggacacgtat gggttggaaatggctctcacgggaatgtgttcattgcgaaatatctagcttga |
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Protein
| Protein ID | pfu_aug2.0_548.1_27524.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_548.1_27524.t1 MSDNEAASIPPQTFVECGRCGGNANISWFCKNCPTSLCDDCATAHKTNHQYKSHAVVPRTYTVLRLYGPAKLAEQCHIHL EKEILSYCNECDMPCCISCLANNHNGHNFSTIEDKYLDAEKGLNEYYRHLDTDIRPTLEKMEEQARADVREDDMNVEKVI DEINDFRTNVVQNFNRACDDLIVQVKKISCENTKSLREIESLMQNLESIKNEITAKIAEGNLDIIKYRPPDFETLFPKLD KAKTVVPVFKPSSKVLCVIKESVGIIDFKKISRRDRNKTNITVNVEKINTFNSKIGATSMNTAGNNMAWIAFLFSPTIYL YNDKGEVVRPVTMKGCTGINGISITQSGDMIVTCNDKKVRRVSVSGEVSTMIDTDPFDCKGVCLTDKEEIVVCLIGNAEM NHVVVFSPDGRSQLREMRKKDGRGNQLIVTPVCVARNGQDLCVVNGRNNVVCIDKRDNVRWIYDGNQAKLGESFSPRCIC VDKYHNTLVSDGNNHCVHYIDREGGLIKVILTKEETEFTSHWGICVDNFTGHVWVGNGSHGNVFIAKYLA |
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