Gene
| Gene Model ID | pfu_aug2.0_549.1_30898 |
|---|---|
| Locus | scaffold549.1 : 59567 ... 65975 : - |
| To GenomeBrowser | scaffold549.1:59567..65975 |
| Genes list of scaffold | scaffold549.1 |
| Synonym | pfu_aug1.0_40099.1_26917 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_549.1_30898.t1 | 1 | 1 | Med11 | 6 | 106 | 9.9e-21 | 73.9 | 4.3e-24 | 1.3e-20 | 73.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_549.1_30898.t1 | gi|524871946|ref|XP_005092743.1| | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Aplysia californica] | 6.0e-40 |
| pfu_aug2.0_549.1_30898.t1 | gi|676463370|ref|XP_009056575.1| | hypothetical protein LOTGIDRAFT_162368 [Lottia gigantea] | 1.0e-38 |
| pfu_aug2.0_549.1_30898.t1 | gi|350420514|ref|XP_003492533.1| | PREDICTED: mediator of RNA polymerase II transcription subunit 11 [Bombus impatiens] | 5.0e-36 |
| pfu_aug2.0_549.1_30898.t1 | gi|749787807|ref|XP_011147403.1| | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Harpegnathos saltator] | 1.0e-35 |
| pfu_aug2.0_549.1_30898.t1 | gi|91083293|ref|XP_974541.1| | PREDICTED: mediator of RNA polymerase II transcription subunit 11 [Tribolium castaneum] | 5.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_549.1_30898.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_549.1_30898.t1 atgtcagcaccggttgacaagttgagggaattggaaacgatagagactgacattgccaatgctgttcagagttctggtta tgcactgcaagagcttgcgaaagaaaaacctgtcatgaagcaagtagaaacacacaccacaagttttatgaagacattag tagaagtagagagaaagcttacaaaacatatcaactacttgacccaagtttcaacaggacagcctcatgagggctcgtca tatgcagctcagaaagatttgaccttggcctatcatcgtatagatcacatcaccagtagtttgaatgaccttggcagact gtctgcagaaccaggtcaacaggtctccaggcaacagatttctaaaagtgacttgttacagatgtcagactga |
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Protein
| Protein ID | pfu_aug2.0_549.1_30898.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_549.1_30898.t1 MSAPVDKLRELETIETDIANAVQSSGYALQELAKEKPVMKQVETHTTSFMKTLVEVERKLTKHINYLTQVSTGQPHEGSS YAAQKDLTLAYHRIDHITSSLNDLGRLSAEPGQQVSRQQISKSDLLQMSD |
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