Gene
| Gene Model ID | pfu_aug2.0_549.1_30902 |
|---|---|
| Locus | scaffold549.1 : 131966 ... 133205 : + |
| To GenomeBrowser | scaffold549.1:131966..133205 |
| Genes list of scaffold | scaffold549.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_549.1_30902.t1 | 1 | 1 | DUF1772 | 23 | 153 | 8.0e-16 | 58.0 | 1.4e-19 | 1.0e-15 | 57.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_549.1_30902.t1 | gi|301122027|ref|XP_002908740.1| | conserved hypothetical protein [Phytophthora infestans T30-4] | 2.0e-16 |
| pfu_aug2.0_549.1_30902.t1 | gi|156388976|ref|XP_001634768.1| | predicted protein [Nematostella vectensis] | 3.0e-15 |
| pfu_aug2.0_549.1_30902.t1 | gi|545358215|ref|XP_005644692.1| | DUF1772-domain-containing protein [Coccomyxa subellipsoidea C-169] | 2.0e-13 |
| pfu_aug2.0_549.1_30902.t1 | gi|695428534|ref|XP_009529973.1| | hypothetical protein PHYSODRAFT_505793 [Phytophthora sojae] | 5.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_549.1_30902.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_549.1_30902.t1 atggagaaattaagtttgatcaatttagcagagtggacagctactggtctgtccgggctttttgcgggaagtgcattgtt tataaatgtagtggacattcccgccatttttacggtacaggatgtgggtgcagtcagacaatactggaagacgctgtata acagggccaagtttctccagggtccattggcaataattgcatcaagcgcaggggttgtagcatggaatgggagtacgtgc aacaatagatgggtgtggttattggggtctggagtgatgatttcagtatggcctttctatatcattgtcatgttacctgg tataagaaaattacttgacgaccgcgtcgtacgggagaaaggagaaagatgggtgaaaagcagcatctcatcctggaata agcagcatatggtcagaacaatagcagggattttggcgaacgatattttcattttagcaattttcttaacacgctga |
|
Protein
| Protein ID | pfu_aug2.0_549.1_30902.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_549.1_30902.t1 MEKLSLINLAEWTATGLSGLFAGSALFINVVDIPAIFTVQDVGAVRQYWKTLYNRAKFLQGPLAIIASSAGVVAWNGSTC NNRWVWLLGSGVMISVWPFYIIVMLPGIRKLLDDRVVREKGERWVKSSISSWNKQHMVRTIAGILANDIFILAIFLTR |
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