Gene
| Gene Model ID | pfu_aug2.0_549.1_30904 |
|---|---|
| Locus | scaffold549.1 : 139603 ... 149465 : - |
| To GenomeBrowser | scaffold549.1:139603..149465 |
| Genes list of scaffold | scaffold549.1 |
| Synonym | pfu_aug1.0_88951.1_71328 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_549.1_30904.t1 | 1 | 1 | CLAMP | 101 | 201 | 1.4e-22 | 79.7 | 5.0e-26 | 3.7e-22 | 78.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_549.1_30904.t1 | gi|676456355|ref|XP_009054297.1| | hypothetical protein LOTGIDRAFT_203888 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_549.1_30904.t1 | gi|524893767|ref|XP_005103392.1| | PREDICTED: uncharacterized protein C10orf107 homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_549.1_30904.t1 | gi|291239863|ref|XP_002739841.1| | PREDICTED: uncharacterized protein C10orf107-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_549.1_30904.t1 | gi|585701653|ref|XP_006822918.1| | PREDICTED: uncharacterized protein C10orf107-like isoform X2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_549.1_30904.t1 | gi|156371791|ref|XP_001628945.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_549.1_30904.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_549.1_30904.t1 atggcgtccaaaagcggttcgaaggtttcctcaaaatcaggaggcaaaacttcttctcaaacaagtgcctctcaatctaa acaagatccaaaaggcaaaaaagcagttactatagcagatgaagaggaggaagatgacaaggcagggagcatggcttaca agatcctctctgctgaacagagcaaggaattactaggaatgcagatacttgaaatgcagagtaagttaagtgagatattt agccttggtaactacagcactgacctacagcatgcagccacactggattactatacagcagcagtatggtggggaaaaca acaaaactttactgaagctcagctatcagggttcttcacagtaatatacacactgtttgacaatatcaaagagaaacaca tgcatttggtggacaatttgaaggagtaccagacattactgaagggtatagaaccagagcatcctgatgtcaaatcagag ggcttggacttcttcaatgtggtacaagctaaagctgtgtcagattatatattccagagtgtattccagcattacagatt atatgagtttatgttttcacatactcaagcagaggaaatcattggcacagatctagagatagaggtggctaagccggcat ccatgccatttcctcctccgctggatgaaggtgccgaggaagagttgtttaatacttacattgccacaccacctccaact cccgctcctgaggagggagatggtaaagatactaaagatgaaggtccagagatacaagacattgacgcatttgctgaact tacgccacaagatgtacaggaagtcatagaaagtgttacaaaagaattattatcaggtttacagatggatattgctgcta aattgagagaaaaagagaacaatttaattcagaggataaataaagttcataaagttgtggaacagacttag |
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Protein
| Protein ID | pfu_aug2.0_549.1_30904.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_549.1_30904.t1 MASKSGSKVSSKSGGKTSSQTSASQSKQDPKGKKAVTIADEEEEDDKAGSMAYKILSAEQSKELLGMQILEMQSKLSEIF SLGNYSTDLQHAATLDYYTAAVWWGKQQNFTEAQLSGFFTVIYTLFDNIKEKHMHLVDNLKEYQTLLKGIEPEHPDVKSE GLDFFNVVQAKAVSDYIFQSVFQHYRLYEFMFSHTQAEEIIGTDLEIEVAKPASMPFPPPLDEGAEEELFNTYIATPPPT PAPEEGDGKDTKDEGPEIQDIDAFAELTPQDVQEVIESVTKELLSGLQMDIAAKLREKENNLIQRINKVHKVVEQT |
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