Gene
| Gene Model ID | pfu_aug2.0_5498.1_29433 |
|---|---|
| Locus | scaffold5498.1 : 9476 ... 18445 : + |
| To GenomeBrowser | scaffold5498.1:9476..18445 |
| Genes list of scaffold | scaffold5498.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5498.1_29433.t1 | 1 | 1 | Lectin_C | 37 | 126 | 7.8e-11 | 42.5 | 1.6e-14 | 1.2e-10 | 41.9 |
| pfu_aug2.0_5498.1_29433.t1 | 1 | 1 | VWA | 124 | 192 | 2.5e-07 | 30.6 | 4.8e-11 | 3.6e-07 | 30.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5498.1_29433.t1 | gi|390337567|ref|XP_794198.3| | 9.0e-09 | |
| pfu_aug2.0_5498.1_29433.t1 | gi|345321999|ref|XP_001507516.2| | PREDICTED: pulmonary surfactant-associated protein D [Ornithorhynchus anatinus] | 2.0e-08 |
| pfu_aug2.0_5498.1_29433.t1 | gi|390359696|ref|XP_003729543.1| | PREDICTED: galactose-specific lectin nattectin-like [Strongylocentrotus purpuratus] | 6.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_5498.1_29433.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5498.1_29433.t1 atgttactcaccagagcagttatattgttgggagttcttataggaggacaatgtggtggtgattggttacattgtggtaa tcacacttttcgcaaagtaaatattgaaatggactggacaagcgctaaacattactgtgaaggcaagctaaaggccgatc ttgcatctctatttaacgctaatatcaacagatgtgtcacagattattatgccggagataacgatatttactggatttca ctcaatgacagagatagtgagggatcctttgtttggacgggacagaaagaaaagctttccttaaatccacttggttggtc tgggtggaatgaaggtgaacctaatgactacagtggtggcgaagattgtgtcgagtatataaaggatgttgtcgactacc tgcccataggtgaaaatgacatccaagtggctgtagcaacatactccagggacactgaattgcttatttcatttgaccag tatcaaaatagatctaatctcagccaagctataagtgctttatcattacctgaagcgacagaaagaggtcctactttaac atcacatgctttaaaatgggccgataaggtgagaaagaattcgtag |
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Protein
| Protein ID | pfu_aug2.0_5498.1_29433.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5498.1_29433.t1 MLLTRAVILLGVLIGGQCGGDWLHCGNHTFRKVNIEMDWTSAKHYCEGKLKADLASLFNANINRCVTDYYAGDNDIYWIS LNDRDSEGSFVWTGQKEKLSLNPLGWSGWNEGEPNDYSGGEDCVEYIKDVVDYLPIGENDIQVAVATYSRDTELLISFDQ YQNRSNLSQAISALSLPEATERGPTLTSHALKWADKVRKNS |
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