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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_5498.1_29434
Locus scaffold5498.1 : 23780 ... 27448 : -
To GenomeBrowser scaffold5498.1:23780..27448
Genes list of scaffold scaffold5498.1
Synonym pfu_aug1.0_21.1_21916

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_5498.1_29434.t1 gi|395541383|ref|XP_003772624.1| 1.0e-29
pfu_aug2.0_5498.1_29434.t1 gi|390334650|ref|XP_003723980.1| 2.0e-28
pfu_aug2.0_5498.1_29434.t1 gi|543254895|ref|XP_005419213.1| PREDICTED: maltase-glucoamylase, intestinal-like [Geospiza fortis] 1.0e-26
pfu_aug2.0_5498.1_29434.t1 gi|632934882|ref|XP_007886824.1| PREDICTED: sucrase-isomaltase, intestinal [Callorhinchus milii] 1.0e-26

Transcript
Transcript IDpfu_aug2.0_5498.1_29434.t1
Definition-
>pfu_aug2.0_5498.1_29434.t1
ggatcagaaataaaagaagatgaatccgggaaatattcaaccctctctgcttcacttgacaccatcaatgttcatcttcg
tggaggtagcattctgccagtacaagaacctgcaaatactacacagttcagccgtctgaatgctatggggcttctagttg
ccatggataaggacactgcttcaggagagctttattttgatgacggtgaaagcatagattctatggagaatgagacatac
cttagcgctagatatggattaacaaagggagtaaagttggagctaattgtggagcatgctggttatactccgccaggtaa
cataagttatgagtatgttcacttttatggattccacagtcttccacaacaagtcatagttaatggcaaaaatataccaa
ttacacaactacaatgggatgttaagataaccagactcaccggtcttcagttagatataatgaagaaccatacgatagaa
tggaagttttactag

Protein
Protein IDpfu_aug2.0_5498.1_29434.t1
Definition-
>pfu_aug2.0_5498.1_29434.t1
GSEIKEDESGKYSTLSASLDTINVHLRGGSILPVQEPANTTQFSRLNAMGLLVAMDKDTASGELYFDDGESIDSMENETY
LSARYGLTKGVKLELIVEHAGYTPPGNISYEYVHFYGFHSLPQQVIVNGKNIPITQLQWDVKITRLTGLQLDIMKNHTIE
WKFY

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