Gene
| Gene Model ID | pfu_aug2.0_55.1_16802 |
|---|---|
| Locus | scaffold55.1 : 1529 ... 21275 : - |
| To GenomeBrowser | scaffold55.1:1529..21275 |
| Genes list of scaffold | scaffold55.1 |
| Synonym | pfu_aug1.0_5445.1_30962 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_55.1_16802.t1 | 1 | 1 | Transcrip_reg | 7 | 201 | 4.9e-33 | 114.2 | 1.0e-36 | 7.5e-33 | 113.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_55.1_16802.t1 | gi|665803126|ref|XP_008549646.1| | PREDICTED: translational activator of cytochrome c oxidase 1, partial [Microplitis demolitor] | 2.0e-17 |
| pfu_aug2.0_55.1_16802.t1 | gi|759052137|ref|XP_011335198.1| | PREDICTED: translational activator of cytochrome c oxidase 1 [Cerapachys biroi] | 6.0e-17 |
| pfu_aug2.0_55.1_16802.t1 | gi|585703275|ref|XP_006897931.1| | PREDICTED: translational activator of cytochrome c oxidase 1-like [Elephantulus edwardii] | 5.0e-16 |
| pfu_aug2.0_55.1_16802.t1 | gi|91085333|ref|XP_970254.1| | PREDICTED: translational activator of cytochrome c oxidase 1 [Tribolium castaneum] | 6.0e-16 |
| pfu_aug2.0_55.1_16802.t1 | gi|242001218|ref|XP_002435252.1| | coiled-coil domain-containing protein, putative [Ixodes scapularis] | 1.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_55.1_16802.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_55.1_16802.t1 atgttgaatttgcttggcgcagcaataaaatctggtgggaactgtaaccccaagactaataatgcattagccaatgccgt ggaaacagctaagaaagccaacatccctaaagctacgattgatggattcataaggaaaatggaagagaagggaaagactt gttcagactaccagttactaatacagggaccacatggcagttactttgtcgtccagggatacactacagccatgagcaag tttactagtgatataaataggctcatcaagaagcagcctctaaaaataagcgagcctggacaacttgcgatgatattcga ctataagggagaagttattatagagaaacccgagggtaaggatttggaggaaatcgcgattacatgtgatgcggaagaat ttgttgaggagaatgacgaggatggcaaagttaatgtcaagtttatatgtgatggtgattctgtgatgggacttaagaag aacttagagacagaagggtacgagatccagggatttgacactgtgtacatacccaaaatccccctagagctgacggacga agaattccaagacgtgaaccgcatgagtgagaaattggaagaagtgttttatgatatatacagcagttcactgcggtttt tggacatggtagtaaagtatttgaggattctgatgtcgccaaaccagttgtctaaaagtctttacactgagttgctccga tctttcactgctacctgttacttaactccaatgagtggtgatgtacttgtaaggcatctcatgttaggaaatgtttgtgt ttcatcaataccagatataagatattatatggaatcggacctggatacagacttacttgctgtagtcactgctgagatga agaacgataagtcaaaattcactcaggaaaaggctgatcaaacatttttgattcattctagtgtagatgacaaggttcta ggtcagcatggtggagagcttatgttagagagaaaattctcttgctttaaaccatttgttctgggcattctttgttttaa aacagagcccctgatccccagggtcttagaaaacggctgtggtcattatctcgtatatagttgtgctatcaactcttcta aagctattaatgatggagacttagatgtttatgcaatataa |
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Protein
| Protein ID | pfu_aug2.0_55.1_16802.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_55.1_16802.t1 MLNLLGAAIKSGGNCNPKTNNALANAVETAKKANIPKATIDGFIRKMEEKGKTCSDYQLLIQGPHGSYFVVQGYTTAMSK FTSDINRLIKKQPLKISEPGQLAMIFDYKGEVIIEKPEGKDLEEIAITCDAEEFVEENDEDGKVNVKFICDGDSVMGLKK NLETEGYEIQGFDTVYIPKIPLELTDEEFQDVNRMSEKLEEVFYDIYSSSLRFLDMVVKYLRILMSPNQLSKSLYTELLR SFTATCYLTPMSGDVLVRHLMLGNVCVSSIPDIRYYMESDLDTDLLAVVTAEMKNDKSKFTQEKADQTFLIHSSVDDKVL GQHGGELMLERKFSCFKPFVLGILCFKTEPLIPRVLENGCGHYLVYSCAINSSKAINDGDLDVYAI |
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