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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_55.1_16803
Locus scaffold55.1 : 27386 ... 29709 : +
To GenomeBrowser scaffold55.1:27386..29709
Genes list of scaffold scaffold55.1
Synonym pfu_aug1.0_3287.1_23274

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_55.1_16803.t1 gi|449668631|ref|XP_004206834.1| PREDICTED: coiled-coil domain-containing protein 70-like [Hydra vulgaris] 7.0e-20
pfu_aug2.0_55.1_16803.t1 gi|572318718|ref|XP_006624926.1| PREDICTED: girdin-like isoform X1 [Apis dorsata] 1.0e-12
pfu_aug2.0_55.1_16803.t1 gi|742150228|ref|XP_010880463.1| PREDICTED: LOW QUALITY PROTEIN: nesprin-1-like [Esox lucius] 3.0e-11
pfu_aug2.0_55.1_16803.t1 gi|572318720|ref|XP_006624927.1| PREDICTED: girdin-like isoform X2 [Apis dorsata] 5.0e-11

Transcript
Transcript IDpfu_aug2.0_55.1_16803.t1
Definition-
>pfu_aug2.0_55.1_16803.t1
atgcttactcctcctgggcacctgatcccatctctagcttgcttggggtccgtcgatgttccatttggtgctctattgga
ccaacctaaccccgtcaggaaacaatctaacccagtcagggaccaacctaacgtagtcagggataaatctaacccagtca
gggatcaatctaacccagtcagggaacaacctaaccccgtcaggaaacaatctaacccagccagggaccaacctaatgca
gtcagggataaatctaaccaaatcaaggaacaatctaacccagttagggaacaatctaacccagtcagggaccaacctaa
cgcagccagagataaatctaacccaatcagggaattaacagtcgtgcccagtctgggaacaacctaa

Protein
Protein IDpfu_aug2.0_55.1_16803.t1
Definition-
>pfu_aug2.0_55.1_16803.t1
MLTPPGHLIPSLACLGSVDVPFGALLDQPNPVRKQSNPVRDQPNVVRDKSNPVRDQSNPVREQPNPVRKQSNPARDQPNA
VRDKSNQIKEQSNPVREQSNPVRDQPNAARDKSNPIRELTVVPSLGTT

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