Gene
| Gene Model ID | pfu_aug2.0_55.1_16807 |
|---|---|
| Locus | scaffold55.1 : 105105 ... 118095 : - |
| To GenomeBrowser | scaffold55.1:105105..118095 |
| Genes list of scaffold | scaffold55.1 |
| Synonym | pfu_aug1.0_343.1_15006 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vasoactive intestinal polypeptide receptor 1 isoform x2 | GO:0004930 GO:0007166 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_55.1_16807.t2 | 1 | 1 | 7tm_2 | 2 | 224 | 1.3e-37 | 129.1 | 9.99967e-42 | 1.6e-37 | 128.9 |
Transcript
| Transcript ID | pfu_aug2.0_55.1_16807.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_55.1_16807.t1 atgcacctctgtcttttcatcagcttcctgatgagtagtgtcaccagcctgctatgggataaacttatccttcaagaccg actggacaaccctgctgaggcctccattatttatcagcatacgattgggtgtcgtgtcctatatttcctcaagcgataca gtaggacgtgtaactacttttggatgttttctgaagcattttacttacatcgacttttggttaaggcgttcaaagtccca aagtcaataattgggtaccatctgttcggctggggcatatccgttataccaattagtgcgtacacctgcgtcaagatagt gatctccgataaaggctgctgggtagaacagcttggaccttgggaatggatactatatctacctaacttaatgacaataa ttggaaatatcgtcttactcggaggaatcctcaggattttgctcactcaagtacacacgcaccctaatgaacctaacaac tacaggagggctataaaagcgacatttgtattggtaccgcttttcggcatccatttattctgtgtaatatttcgaccaaa cacggattcgtcaggaagacttacatacgaactaatatccaaactggtaacggatagtcaaggaattgtcatagcgatca tgttttgtttcttgaatggagaggtgtgcggatatttgaactctaagattgtgtcatgtttacgtacaatggatgagaac gtaaccggattgacgggaacggcgatgacgtacaatacgccgttatttacagcgacatataaaccaaataacaaggatgg tattaaaactaaagaggagtacattggaatgtcgcaaataaaatga |
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| Transcript ID | pfu_aug2.0_55.1_16807.t2 |
| Definition | - |
>pfu_aug2.0_55.1_16807.t2 atgttcttgaaacaactccgtacccagaatagaataaagatgcacctctgtcttttcatcagcttcctgatgagtagtgt caccagcctgctatgggataaacttatccttcaagaccgactggacaaccctgctgaggcctccattatttatcagcata cgattgggtgtcgtgtcctatatttcctcaagcgatacagtaggacgtgtaactacttttggatgttttctgaagcattt tacttacatcgacttttggttaaggcgttcaaagtcccaaagtcaataattgggtaccatctgttcggctggggcatatc cgttataccaattagtgcgtacacctgcgtcaagatagtgatctccgataaaggctgctgggtagaacagcttggacctt gggaatggatactatatctacctaacttaatgacaataattggaaatatcgtcttactcggaggaatcctcaggattttg ctcactcaagtacacacgcaccctaatgaacctaacaactacaggagggctataaaagcgacatttgtattggtaccgct tttcggcatccatttattctgtgtaatatttcgaccaaacacggattcgtcaggaagacttacatacgaactaatatcca aactggtaacggatagtcaaggaattgtcatagcgatcatgttttgtttcttgaatggagaggtgtgcggatatttgaac tctaagattgtgtcatgtttacgtacaatggatgagaacgtaaccggattgacgggaacggcgatgacgtacaatacgcc gttatttacagcgacatataaaccaaataacaaggatggtattaaaactaaagaggagtacattggaatgtcgcaaataa aatga |
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Protein
| Protein ID | pfu_aug2.0_55.1_16807.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_55.1_16807.t1 MHLCLFISFLMSSVTSLLWDKLILQDRLDNPAEASIIYQHTIGCRVLYFLKRYSRTCNYFWMFSEAFYLHRLLVKAFKVP KSIIGYHLFGWGISVIPISAYTCVKIVISDKGCWVEQLGPWEWILYLPNLMTIIGNIVLLGGILRILLTQVHTHPNEPNN YRRAIKATFVLVPLFGIHLFCVIFRPNTDSSGRLTYELISKLVTDSQGIVIAIMFCFLNGEVCGYLNSKIVSCLRTMDEN VTGLTGTAMTYNTPLFTATYKPNNKDGIKTKEEYIGMSQIK |
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| Protein ID | pfu_aug2.0_55.1_16807.t2 |
| Definition | - |
>pfu_aug2.0_55.1_16807.t2 MFLKQLRTQNRIKMHLCLFISFLMSSVTSLLWDKLILQDRLDNPAEASIIYQHTIGCRVLYFLKRYSRTCNYFWMFSEAF YLHRLLVKAFKVPKSIIGYHLFGWGISVIPISAYTCVKIVISDKGCWVEQLGPWEWILYLPNLMTIIGNIVLLGGILRIL LTQVHTHPNEPNNYRRAIKATFVLVPLFGIHLFCVIFRPNTDSSGRLTYELISKLVTDSQGIVIAIMFCFLNGEVCGYLN SKIVSCLRTMDENVTGLTGTAMTYNTPLFTATYKPNNKDGIKTKEEYIGMSQIK |
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