Gene
| Gene Model ID | pfu_aug2.0_55.1_16817 |
|---|---|
| Locus | scaffold55.1 : 391186 ... 404196 : - |
| To GenomeBrowser | scaffold55.1:391186..404196 |
| Genes list of scaffold | scaffold55.1 |
| Synonym | pfu_aug1.0_24172.1_47639 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_55.1_16817.t1 | 2 | 1 | BTB | 11 | 73 | 6.2e-09 | 35.8 | 2.6e-11 | 1.3e-07 | 31.5 |
| pfu_aug2.0_55.1_16817.t1 | 2 | 1 | BACK | 49 | 73 | 7.5e-17 | 61.0 | 0.24 | 1200.0 | -0.7 |
| pfu_aug2.0_55.1_16817.t1 | 2 | 2 | BTB | 77 | 106 | 6.2e-09 | 35.8 | 0.033 | 160.0 | 2.2 |
| pfu_aug2.0_55.1_16817.t1 | 2 | 2 | BACK | 81 | 177 | 7.5e-17 | 61.0 | 7.7e-20 | 3.8e-16 | 58.8 |
| pfu_aug2.0_55.1_16817.t1 | 2 | 1 | F5_F8_type_C | 233 | 318 | 1.8e-10 | 40.7 | 7.7e-07 | 0.0038 | 17.0 |
| pfu_aug2.0_55.1_16817.t1 | 2 | 2 | F5_F8_type_C | 353 | 454 | 1.8e-10 | 40.7 | 1.6e-08 | 8.0e-05 | 22.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_55.1_16817.t1 | gi|524884872|ref|XP_005099050.1| | PREDICTED: BTB/POZ domain-containing protein 9-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_55.1_16817.t1 | gi|676481895|ref|XP_009062524.1| | hypothetical protein LOTGIDRAFT_220364 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_55.1_16817.t1 | gi|260830659|ref|XP_002610278.1| | hypothetical protein BRAFLDRAFT_93002 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_55.1_16817.t1 | gi|564240995|ref|XP_006277321.1| | PREDICTED: BTB/POZ domain-containing protein 9 isoform X3 [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_55.1_16817.t1 | gi|557266463|ref|XP_006018644.1| | PREDICTED: BTB/POZ domain-containing protein 9 isoform X3 [Alligator sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_55.1_16817.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_55.1_16817.t1 atgttgtatggtggacttaaggagtccatgccaggtacgagtgaaatagaactcaaagacacttcagctgctgccttcag agtcctccttaaatacatatataatggcaggattaacttactggaaatcaaggaagagaacctccttgacattttgggcc tggcacatagatttggatttgaggaactagagacgtcaatctctgattatcttaaagctatattgaataactccaacgtg tgtttgatatatgacattgccaacatgtacagtctgacgtccctgtgcttggtgtgtaaggaattcatagacaggaacgc acaggacattctcacagatgaagctttcctgaatctctctcagagttcagttactgcattgatatctagaagttcattct acgccccagaaatagacattttcaattcagtaaaggactgggcagatcataaccaaggaatagatgcctcaccaatcctt gagtctgtccgtctgtctcttatgtccatggacgaactactgaacaaagtaagacccacaggacttgtgtctgccgattc tatattagatgccataaaaacccagacagaatcacggatacttgaccttcagtataggggactgctagtacctgaagaaa acgtagcagcatcccaatttggagcccaaatgatccgtggtgagatgaaaccatacattatagatggagacaaccagaat tatgaccttgacaggggattttcccgacatccgatcgacgataattacggccaggggatcgttataaagctctctcagcc ttacattgttaactccttcagaatgttactgtgggacagagacacaaggtcttactcatactacattgagatctctatgg atgacaaagactatgagaggatagtggatcacagcaagtacttatgtagatcctggcaaactctacactttgaacccaga gttgtaagttattataaccgtatatcggttcccacagagaatgttgcaacgatagatgcctgtgcctgtgtgatagaggg cgtaagccgtagtcgtaatgctctgataaacggtgacacaagacactatgactgggactcaggatatacctgtcaccagc tagggagtggagctatcattgtacagcttgcccagccgtatatggctgaaactatgaggttgttattatgggactgtgat gatagaagctacagttattatgtagaagtatcgaccgatcagaaatcatggaaaatggtggcagatcgtagaaacgaggg ttgcaaatcctggcagttcatcaagtttgacaaacaaccagtatcttttgttaagattgtaggcacacacaatactgcaa atgaggttttccattgtgttcattttgaatgtccggcagaaaatcccagtaaagttggaactaaccacaacttgccccca aataacccaggacccagtgggcaaggccacagtcagggattttccgcacgttttgcaaccatgaatgatagatgcaatcg gaggagtcagggcggtgcacacactgcagcgctgggtgactctccacctgaaagtactgattatctggcacacgaagccc cagaggctgacagactggagtcccggagtaccactgattccgagacgtag |
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Protein
| Protein ID | pfu_aug2.0_55.1_16817.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_55.1_16817.t1 MLYGGLKESMPGTSEIELKDTSAAAFRVLLKYIYNGRINLLEIKEENLLDILGLAHRFGFEELETSISDYLKAILNNSNV CLIYDIANMYSLTSLCLVCKEFIDRNAQDILTDEAFLNLSQSSVTALISRSSFYAPEIDIFNSVKDWADHNQGIDASPIL ESVRLSLMSMDELLNKVRPTGLVSADSILDAIKTQTESRILDLQYRGLLVPEENVAASQFGAQMIRGEMKPYIIDGDNQN YDLDRGFSRHPIDDNYGQGIVIKLSQPYIVNSFRMLLWDRDTRSYSYYIEISMDDKDYERIVDHSKYLCRSWQTLHFEPR VVSYYNRISVPTENVATIDACACVIEGVSRSRNALINGDTRHYDWDSGYTCHQLGSGAIIVQLAQPYMAETMRLLLWDCD DRSYSYYVEVSTDQKSWKMVADRRNEGCKSWQFIKFDKQPVSFVKIVGTHNTANEVFHCVHFECPAENPSKVGTNHNLPP NNPGPSGQGHSQGFSARFATMNDRCNRRSQGGAHTAALGDSPPESTDYLAHEAPEADRLESRSTTDSET |
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