Gene
| Gene Model ID | pfu_aug2.0_55.1_16821 |
|---|---|
| Locus | scaffold55.1 : 461007 ... 468276 : + |
| To GenomeBrowser | scaffold55.1:461007..468276 |
| Genes list of scaffold | scaffold55.1 |
| Synonym | pfu_aug1.0_7911.1_53054 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribonuclease p protein subunit p14 | GO:0016070 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_55.1_16821.t1 | 1 | 1 | RNase_P_Rpp14 | 15 | 112 | 1.5e-16 | 60.2 | 2.4e-20 | 1.8e-16 | 59.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_55.1_16821.t1 | gi|731257803|ref|XP_010641443.1| | PREDICTED: ribonuclease P protein subunit p14 [Fukomys damarensis] | 1.0e-32 |
| pfu_aug2.0_55.1_16821.t1 | gi|674065061|ref|XP_008839412.1| | PREDICTED: ribonuclease P protein subunit p14 [Nannospalax galili] | 3.0e-31 |
| pfu_aug2.0_55.1_16821.t1 | gi|507633381|ref|XP_004628405.1| | PREDICTED: ribonuclease P protein subunit p14-like [Octodon degus] | 8.0e-31 |
| pfu_aug2.0_55.1_16821.t1 | gi|532062694|ref|XP_005317223.1| | PREDICTED: ribonuclease P protein subunit p14 isoform X1 [Ictidomys tridecemlineatus] | 9.0e-31 |
| pfu_aug2.0_55.1_16821.t1 | gi|667282493|ref|XP_008574788.1| | PREDICTED: ribonuclease P protein subunit p14 [Galeopterus variegatus] | 1.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_55.1_16821.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_55.1_16821.t1 atgccaagaaagagatccaaagacaatggactccaatacttttacatgaagataaagttggaatttgaagatgaaagttt tcaccatgatttaagtgcagcattgtttaaaacaattatcaactctgcagttaaagatatgtttggcgagattggtttga gcaatacgattgatatattgaagtatacagaagagagcaaagaagcccttttacgagttgcgtatcaattccatgtacag ctttggagttcccttacgttgatcagtaactatagcaacaagagatgtgcctttagagtattacaggtttccccacattt gacggctctgtcaaataacagcagagaaatgtgtatacctacaccaaagtctgataagctaacttga |
|
Protein
| Protein ID | pfu_aug2.0_55.1_16821.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_55.1_16821.t1 MPRKRSKDNGLQYFYMKIKLEFEDESFHHDLSAALFKTIINSAVKDMFGEIGLSNTIDILKYTEESKEALLRVAYQFHVQ LWSSLTLISNYSNKRCAFRVLQVSPHLTALSNNSREMCIPTPKSDKLT |
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