Gene
| Gene Model ID | pfu_aug2.0_550.1_00873 |
|---|---|
| Locus | scaffold550.1 : 94642 ... 100153 : + |
| To GenomeBrowser | scaffold550.1:94642..100153 |
| Genes list of scaffold | scaffold550.1 |
| Synonym | pfu_aug1.0_39990.1_12397 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_550.1_00873.t1 | 3 | 1 | BTB | 10 | 114 | 6.1e-22 | 77.7 | 1.9e-23 | 4.7e-20 | 71.6 |
| pfu_aug2.0_550.1_00873.t1 | 3 | 2 | BTB | 115 | 142 | 6.1e-22 | 77.7 | 0.0058 | 14.0 | 5.6 |
| pfu_aug2.0_550.1_00873.t1 | 3 | 3 | BTB | 182 | 182 | 6.1e-22 | 77.7 | 1.0 | 2500.0 | -1.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_550.1_00873.t1 | gi|675846990|ref|XP_009009055.1| | hypothetical protein HELRODRAFT_158836 [Helobdella robusta] | 2.0e-29 |
| pfu_aug2.0_550.1_00873.t1 | gi|156402666|ref|XP_001639711.1| | predicted protein [Nematostella vectensis] | 9.0e-26 |
| pfu_aug2.0_550.1_00873.t1 | gi|156350123|ref|XP_001622151.1| | hypothetical protein NEMVEDRAFT_v1g248552 [Nematostella vectensis] | 1.0e-24 |
| pfu_aug2.0_550.1_00873.t1 | gi|156369752|ref|XP_001628138.1| | predicted protein [Nematostella vectensis] | 1.0e-21 |
| pfu_aug2.0_550.1_00873.t1 | gi|312085712|ref|XP_003144788.1| | BTB/POZ domain-containing protein [Loa loa] | 6.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_550.1_00873.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_550.1_00873.t1 atggcggacgctggagatctaagggacttcacccaacctgacgaactgagtgacctgaccatcatcatcaaggggacacc acttcatgtacataaacaataccttgcagagtggtctcccgtgtggagaaggatgttcctagaaagctttactgatcatg acgaattaaaggaagttcagctacctgacaaaaatatagacgagtttacagaactactgcactgtatctactcaactcaa aaacctatctcagtccataatgttgcattcctgttggagcttgcagaggagtaccaaatggagagaataaccaaaaggtg tgaggagttcctaatgaaccaggagcgtagtattgaaattctggtgctagcacaaaagttccatttgaaaaacgtttaca aacgatgtgtggaatttgcaaaaacccgaacattggaggatctagaaactgatccagaaaccaaaaacctggatccacaa actctactgagcatttataagggcaaaatagaaatgttactggactactctaatgaactgaagcaaaatgaagacaagat gtcacaggaacgagatttactaaagatggaaaaggagaacatgaagagaagtctacaatcgatacagaaactgtgggata cccctaataaacggtgctaccgacatatgtcagacaatctgtatgattattcttgtgctgagtgcaatgagaaaatgtac cgtgaagtgaggaaactttgtggggaagggcagcatttaaggagatactttcccaaaattcccccaaagtga |
|
Protein
| Protein ID | pfu_aug2.0_550.1_00873.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_550.1_00873.t1 MADAGDLRDFTQPDELSDLTIIIKGTPLHVHKQYLAEWSPVWRRMFLESFTDHDELKEVQLPDKNIDEFTELLHCIYSTQ KPISVHNVAFLLELAEEYQMERITKRCEEFLMNQERSIEILVLAQKFHLKNVYKRCVEFAKTRTLEDLETDPETKNLDPQ TLLSIYKGKIEMLLDYSNELKQNEDKMSQERDLLKMEKENMKRSLQSIQKLWDTPNKRCYRHMSDNLYDYSCAECNEKMY REVRKLCGEGQHLRRYFPKIPPK |
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