Gene
| Gene Model ID | pfu_aug2.0_550.1_00876 |
|---|---|
| Locus | scaffold550.1 : 167179 ... 173401 : - |
| To GenomeBrowser | scaffold550.1:167179..173401 |
| Genes list of scaffold | scaffold550.1 |
| Synonym | pfu_aug1.0_43467.1_55902 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_550.1_00876.t1 | 2 | 1 | Otopetrin | 369 | 432 | 0.0 | 172.8 | 1.1e-19 | 1.7e-15 | 56.9 |
| pfu_aug2.0_550.1_00876.t1 | 2 | 2 | Otopetrin | 439 | 566 | 0.0 | 172.8 | 5.4e-39 | 8.1e-35 | 120.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_550.1_00876.t1 | gi|676493214|ref|XP_009066168.1| | hypothetical protein LOTGIDRAFT_93565, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_550.1_00876.t1 | gi|524880321|ref|XP_005096826.1| | PREDICTED: otopetrin-2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_550.1_00876.t1 | gi|676484338|ref|XP_009063314.1| | hypothetical protein LOTGIDRAFT_221019 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_550.1_00876.t1 | gi|676460242|ref|XP_009055559.1| | hypothetical protein LOTGIDRAFT_104940 [Lottia gigantea] | 9.99995e-41 |
| pfu_aug2.0_550.1_00876.t1 | gi|391335869|ref|XP_003742309.1| | PREDICTED: otopetrin-2-like [Metaseiulus occidentalis] | 9.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_550.1_00876.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_550.1_00876.t1 atgtcggggctcgattcgagcgaattacaagatcttgtcggtgaaagcaacaataccgacagtgacaaaacgaacgatgt aggtgaaaaggagacagaacagacggagctttcatcgccgccgttgtcttcgcccgaaataacgagtttacgaaaaaaga aagatcacgaaaaatacaaaagacagaagcaatatgattatagcactacagggtctctgcatagaaagaaacctaaacct ctcccgtataacgataagcggcgaaactcggcgcctgtgatgggatatcagaaaccggaagaagttctagaacggaaatg ttcgcatgcaaccatcagtgaaaatgcgaaagaagaggaaaattcgaaaaacaacacggacaaaaatcaagaaaagaagt ttctccatacaataggtggggaagggatatctcagtcgctcatattgtcaaatggatctctgaaaagacctaagccggca aggagacagatttctgtaatgtccgtggcatctcaagtgtcagatgtcctcgaggagaaggaatctgacaaagctattca aatgatatcagacgaaatgtacgtggaagagggaagtaggatggccttgaccttcgataaagcagacgtcaattatatta ggagcaatgacgtcgacgaggccaggaaaagagaatacaacaaaagattattaagggacaacctatcagctagtatgagc ggtttgtatggtatcttcctagccgttctaggtacagtcctaccaataacagaaacgttcgctggtgaacctaatcctta tatgtttgagctttactacgtgtacttgtatacagtcagcctcgctttcatcgtatacgtcaacgtatgtgttcttcaat ggagacccataaaatccaagttcctgtctagattattctgtgggatcagacagattgcatccagagtgtgcgataggata agaaagtgtcgacggaccgaagggaacgaaacagcggacgaggccagtcaaggagacgaagaaaatacacgactaaaaga tgacgaagaggagagtgttcgagtggtacatacgtcagcacgacgtcataccggtagctttccattgagactaggagctg tcggatttgggatcgccagtatgattcacagtggtctgtacttcggacagtattttcagacgagagatggatcatcaata tgtcataattctgtccatgccatcaaacctttcatgcatcttctctttacatttgtacaactttacttcatattcatgaa ttcaaagttccatgtcaatatcaaaggtggtatagaggaacctttgacactcatttcattttcaggactgtttatgttcg cggttttcagtgtggtcgcagcaacttttgaaattcacactccgagtggtgttctcaacattttgactaatctattcatg atcgtgcaatctacaatccaaactctcttcatcatcgccggcagcaaggtatccgctgttacggttgaacaagagcgcaa aaagcgcgggagagaatttgtcgccttcctcatattgtgcaacttttctatgtgggccatgaatacgtttgaaacacaga aacctgaacacaacccagtccaaatggacttctacggcccactaccttggtccatatttactcatattactgttccactt ggaatttacttcaggtttcattctgccgtttgtttgaccaatatttggaaaaatgcatggaaaccgcatccaaattcaat agagaggagagaatccgaaaaggaagaagtttga |
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Protein
| Protein ID | pfu_aug2.0_550.1_00876.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_550.1_00876.t1 MSGLDSSELQDLVGESNNTDSDKTNDVGEKETEQTELSSPPLSSPEITSLRKKKDHEKYKRQKQYDYSTTGSLHRKKPKP LPYNDKRRNSAPVMGYQKPEEVLERKCSHATISENAKEEENSKNNTDKNQEKKFLHTIGGEGISQSLILSNGSLKRPKPA RRQISVMSVASQVSDVLEEKESDKAIQMISDEMYVEEGSRMALTFDKADVNYIRSNDVDEARKREYNKRLLRDNLSASMS GLYGIFLAVLGTVLPITETFAGEPNPYMFELYYVYLYTVSLAFIVYVNVCVLQWRPIKSKFLSRLFCGIRQIASRVCDRI RKCRRTEGNETADEASQGDEENTRLKDDEEESVRVVHTSARRHTGSFPLRLGAVGFGIASMIHSGLYFGQYFQTRDGSSI CHNSVHAIKPFMHLLFTFVQLYFIFMNSKFHVNIKGGIEEPLTLISFSGLFMFAVFSVVAATFEIHTPSGVLNILTNLFM IVQSTIQTLFIIAGSKVSAVTVEQERKKRGREFVAFLILCNFSMWAMNTFETQKPEHNPVQMDFYGPLPWSIFTHITVPL GIYFRFHSAVCLTNIWKNAWKPHPNSIERRESEKEEV |
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