Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_5516.1_22684
Locus scaffold5516.1 : 1 ... 6085 : -
To GenomeBrowser scaffold5516.1:1..6085
Genes list of scaffold scaffold5516.1
Synonym pfu_aug1.0_1480.1_22605

Manual annotation
Annotation by Blast2GO
Annotation GO
low quality protein: enteropeptidase GO:0003824

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_5516.1_22684.t1 1 1 Trypsin 37 235 9.99967e-42 142.9 2.8026e-45 1.19993e-41 142.7

Transcript
Transcript IDpfu_aug2.0_5516.1_22684.t1
Definition-
>pfu_aug2.0_5516.1_22684.t1
atgaaaaggattcttgtagttgtagcttccagtgctattggaacacgaagtctgccagacaatgcaaactgtggtaaaca
gcactatccacctcatgcaagtaagcgtattgtaggaggtcaagaggtccgagctaacagctggccatggatggcagccc
tgagattcgatggtacacttgtatgtggtggaacagtagttcgaaataacactggttcaatggtagttataacagctgcg
cattgtgttgacggaactctatcggatcctaatcggtgggaagtacgacttggattccacagtcgaaattatccaggcgc
ttctagctactacagagctttcaaagttctaaaaataatagaacacgagagttttcagtcatacaatcttcaaaacgaca
ttgctattttgatactggacggagaggtcaaagagagtgaaggtatcagtccagcgtgtgttactcgtgacatatactat
gcaggagagaactgtgtatctttaggatggggaacgacatatcagggtggagaagtgtctgataaactacaagaggtata
caaacctttgctcaacactacatcgtgttacagttacctacaggacctttttgaaggcacaactatgttatgtgcaggat
ttgaaagtggaggaagcggacattgctttagagactccggcggccctcttctttgtaaaagaaatgatcagtggtatttg
acag

Protein
Protein IDpfu_aug2.0_5516.1_22684.t1
Definition-
>pfu_aug2.0_5516.1_22684.t1
MKRILVVVASSAIGTRSLPDNANCGKQHYPPHASKRIVGGQEVRANSWPWMAALRFDGTLVCGGTVVRNNTGSMVVITAA
HCVDGTLSDPNRWEVRLGFHSRNYPGASSYYRAFKVLKIIEHESFQSYNLQNDIAILILDGEVKESEGISPACVTRDIYY
AGENCVSLGWGTTYQGGEVSDKLQEVYKPLLNTTSCYSYLQDLFEGTTMLCAGFESGGSGHCFRDSGGPLLCKRNDQWYL
T

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495