Gene
| Gene Model ID | pfu_aug2.0_552.1_07660 |
|---|---|
| Locus | scaffold552.1 : 1 ... 13265 : - |
| To GenomeBrowser | scaffold552.1:1..13265 |
| Genes list of scaffold | scaffold552.1 |
| Synonym | pfu_aug1.0_2097.1_08222 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_552.1_07660.t1 | 1 | 1 | Ependymin | 63 | 138 | 1.7e-10 | 40.7 | 1.5e-14 | 2.2e-10 | 40.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_552.1_07660.t1 | gi|524901263|ref|XP_005107042.1| | PREDICTED: mammalian ependymin-related protein 1-like [Aplysia californica] | 9.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_552.1_07660.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_552.1_07660.t1 atgaccatgtacggtgtaactctcctcctctgtctatctgtggcagtgtttgcccaggatcctatgccatgcaatccccc tccacagtgggaagcacgagagatcagggttgataggcaacagaactttgaggagaggagaagattggtttatgatgcag caaatagacgtgagaggcgaattgaagaggtggaagttaacagcacaagaagcttctacgatgaactcatcctgtggaat gagaataaacaatacagagtagatctaaggaccaagaaatgtaatataaccgtaccatacagggaatggaggcctagagg tgtaccaccagagtctaagtttgaatatgaagcggtgattggagcagcgggtatacctggagaatcagtcacaatacaga ttttcacttggaattcaactgacggag |
|
Protein
| Protein ID | pfu_aug2.0_552.1_07660.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_552.1_07660.t1 MTMYGVTLLLCLSVAVFAQDPMPCNPPPQWEAREIRVDRQQNFEERRRLVYDAANRRERRIEEVEVNSTRSFYDELILWN ENKQYRVDLRTKKCNITVPYREWRPRGVPPESKFEYEAVIGAAGIPGESVTIQIFTWNSTDG |
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